Gene
| Gene Model ID | pfu_aug2.0_205.1_17109 |
|---|---|
| Locus | scaffold205.1 : 95146 ... 125043 : + |
| To GenomeBrowser | scaffold205.1:95146..125043 |
| Genes list of scaffold | scaffold205.1 |
| Synonym | pfu_aug1.0_1163.1_65856 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_205.1_17109.t1 | 1 | 1 | C2 | 54 | 141 | 2.8e-21 | 75.1 | 1.6e-24 | 5.8e-21 | 74.1 |
| pfu_aug2.0_205.1_17109.t1 | 5 | 1 | WW | 216 | 222 | 0.0 | 161.4 | 0.59 | 2200.0 | -1.4 |
| pfu_aug2.0_205.1_17109.t1 | 5 | 2 | WW | 251 | 281 | 0.0 | 161.4 | 3.6e-15 | 1.3e-11 | 44.0 |
| pfu_aug2.0_205.1_17109.t1 | 5 | 3 | WW | 296 | 325 | 0.0 | 161.4 | 3.9e-15 | 1.4e-11 | 43.9 |
| pfu_aug2.0_205.1_17109.t1 | 5 | 4 | WW | 389 | 418 | 0.0 | 161.4 | 5.9e-13 | 2.2e-09 | 37.0 |
| pfu_aug2.0_205.1_17109.t1 | 5 | 5 | WW | 456 | 485 | 0.0 | 161.4 | 6.5e-17 | 2.4e-13 | 49.6 |
| pfu_aug2.0_205.1_17109.t1 | 1 | 1 | HECT | 573 | 807 | 0.0 | 201.6 | 0.0 | 0.0 | 200.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_205.1_17109.t1 | gi|571508326|ref|XP_006571319.1| | PREDICTED: E3 ubiquitin-protein ligase Nedd-4 isoform X7 [Apis mellifera] | 0.0 |
| pfu_aug2.0_205.1_17109.t1 | gi|752874716|ref|XP_011254688.1| | PREDICTED: E3 ubiquitin-protein ligase Nedd-4 isoform X2 [Camponotus floridanus] | 0.0 |
| pfu_aug2.0_205.1_17109.t1 | gi|524889909|ref|XP_005101506.1| | PREDICTED: E3 ubiquitin-protein ligase NEDD4-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_205.1_17109.t1 | gi|284005136|ref|NP_001164707.1| | neural precursor cell expressed, developmentally down-regulated 4-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_205.1_17109.t1 | gi|340709068|ref|XP_003393137.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_205.1_17109.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_205.1_17109.t1 atgtttaaggcgttattggtaacttacgttgaagggaagaagtataagtcattcgccacgtgggcgactcacctcgacaa agncttgagtcatgcaagtgaattttctatcctcagcattttctcgtggcaaaatgatccaccaggtacaacaaagctcc ttcgtattaaagtcatcaagggaagtgatttggccaaaaaagatatatttggagcgagtgatccatatgtaagaataagc ctttacagaggtgatagagagcatggacttatagatacagccgttacttccaccattaaaaagacactgaatccaaaatg gaacgaagaattcctatttagagtgaatcccagagacaatgctttattatttgaagtttttgattccaacagagttacga gagatgacttccttgggctggtagagatccccctatcacatacctttatcaacactgagaattcagatagtgacattccc actaaaaactacatccttagaccgcgcagttcaaggtcaagggtgaagggctgtctactgctatatttagcctttgtgcc gacagagtcggatgaaggtcaagaacaggaagaagaaactcaaaatgaggctggtgctcaggacaactcggaggtcagta atcagccgggctgggaaatggtggacttggaaaatgcaattaatgaatctggagcttctggtcctacaaataaccaatca gaaacggctaactccactcctgccgagcccctacccccaggctgggaaaagaggatacacccaacaactaacaggatata ttatatcaatcacaataccagaacaactcaatggaaaccgccaacaaacaccagtacaagagaggccactgtgagcagtg acagtttaccagagggctgggaagaaaaaacggactcaaacggcaggacgtactacatcaatactaacactcgcacagtt caatggacaaggcctggagcttcgaacgaggatcatcaagcaaccatgagtcgtcgttggagggaagctgcggcagaaat gtatcgtaaccgtcgacacgtcagtcgagaggacaccatgagtatggttagtgaaacagcaataccttccgctcctcaag aaacaagggaagacaactctgctacgacagaagatgaggagcctttacctgcaggatgggccatgggtgtggctcccagt ggcagagtcttctatatagatcataatacagaacaaaccacatgggaggacccacgacaaactatgcagcatcaccgtgt agccagtatgaggtcggcagcagaggctcctggattacaacaaagagcctcctctaatgaggacctcctcagaaacctag gaccactaccaagtggctgggaggagagaacacactctgatggcagagtattctatatcaaccacagtacaaaaacaaca caatgggaggatcctcgtctacagaagtttggaggtccagctgtaccgtattctagagattttaagaggaaatatgatta cttcagatccaaactaagaaaaccacaaaatataccaaacaaagttgatgttaaggtcagcagggagaggatatttgagg attcatacagaagtataatgtcacagaagaaaacagatatactcaaagcgaggttatggatagaatttgatggtgaggtt ggtttggattacggcggtgtcagcagagaatggttctatcttctatcaaaggaaatgtttaatccatattacggcttgtt tgaatattctgcaacatttattgttttccacttccacagtgacaattatacattacaaatcaacccactatcaggattag ccaatgacgagcatttatcatactttgaattcattggtcggatagcaggaatggcagtctttcatggcaaattattggat ggcttctttatccgtccattctacaaaatgatgttagcaaagcctataacactggcagacatggaaccagtagattctga atattataattccttagtatggatcagggataatgaccctgctgatttggaacttacattctctgttgaggaagattatt ttggagagataacagagagggaattgaagccgggaggtgcagatatcaaagttaccaatgagaataagttggagtatata cagttggtcattcgatggcgttttgtatcaagaatagaaaagcagatgaattctttaatgaaaggtttcacggctattgt tccacagtctatgatacagatctttgatgaaaatgagttggagcttttgttgagcggtttacaagacatagacgtgaatg actggaagtccaactcggcttacaaaggagaatataatcctaaccatcctgttataatcaatttctggaaggtttgtgga aaatttgttaaaaaaaaaatgattcggttaatttga |
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Protein
| Protein ID | pfu_aug2.0_205.1_17109.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_205.1_17109.t1 MFKALLVTYVEGKKYKSFATWATHLDKXLSHASEFSILSIFSWQNDPPGTTKLLRIKVIKGSDLAKKDIFGASDPYVRIS LYRGDREHGLIDTAVTSTIKKTLNPKWNEEFLFRVNPRDNALLFEVFDSNRVTRDDFLGLVEIPLSHTFINTENSDSDIP TKNYILRPRSSRSRVKGCLLLYLAFVPTESDEGQEQEEETQNEAGAQDNSEVSNQPGWEMVDLENAINESGASGPTNNQS ETANSTPAEPLPPGWEKRIHPTTNRIYYINHNTRTTQWKPPTNTSTREATVSSDSLPEGWEEKTDSNGRTYYINTNTRTV QWTRPGASNEDHQATMSRRWREAAAEMYRNRRHVSREDTMSMVSETAIPSAPQETREDNSATTEDEEPLPAGWAMGVAPS GRVFYIDHNTEQTTWEDPRQTMQHHRVASMRSAAEAPGLQQRASSNEDLLRNLGPLPSGWEERTHSDGRVFYINHSTKTT QWEDPRLQKFGGPAVPYSRDFKRKYDYFRSKLRKPQNIPNKVDVKVSRERIFEDSYRSIMSQKKTDILKARLWIEFDGEV GLDYGGVSREWFYLLSKEMFNPYYGLFEYSATFIVFHFHSDNYTLQINPLSGLANDEHLSYFEFIGRIAGMAVFHGKLLD GFFIRPFYKMMLAKPITLADMEPVDSEYYNSLVWIRDNDPADLELTFSVEEDYFGEITERELKPGGADIKVTNENKLEYI QLVIRWRFVSRIEKQMNSLMKGFTAIVPQSMIQIFDENELELLLSGLQDIDVNDWKSNSAYKGEYNPNHPVIINFWKVCG KFVKKKMIRLI |
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