Gene
| Gene Model ID | pfu_aug2.0_205.1_17114 |
|---|---|
| Locus | scaffold205.1 : 178300 ... 191414 : + |
| To GenomeBrowser | scaffold205.1:178300..191414 |
| Genes list of scaffold | scaffold205.1 |
| Synonym | pfu_aug1.0_2615.1_23033 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_205.1_17114.t1 | 1 | 1 | Misat_Tub_SegII | 4 | 121 | 8.4e-39 | 132.1 | 5.70048e-42 | 2.1e-38 | 130.9 |
| pfu_aug2.0_205.1_17114.t1 | 2 | 1 | Tubulin | 5 | 72 | 4.5e-14 | 52.7 | 2.0e-06 | 0.0074 | 16.1 |
| pfu_aug2.0_205.1_17114.t1 | 2 | 2 | Tubulin | 143 | 300 | 4.5e-14 | 52.7 | 5.1e-12 | 1.9e-08 | 34.4 |
| pfu_aug2.0_205.1_17114.t1 | 1 | 1 | Tubulin_3 | 174 | 355 | 1.1e-29 | 103.1 | 7.0e-33 | 2.6e-29 | 101.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_205.1_17114.t1 | gi|676463741|ref|XP_009056694.1| | hypothetical protein LOTGIDRAFT_120630 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_205.1_17114.t1 | gi|524893755|ref|XP_005103386.1| | PREDICTED: protein misato homolog 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_205.1_17114.t1 | gi|390366779|ref|XP_792803.3| | 0.0 | |
| pfu_aug2.0_205.1_17114.t1 | gi|545216614|ref|XP_005610089.1| | PREDICTED: protein misato homolog 1 isoform X3 [Equus caballus] | 0.0 |
| pfu_aug2.0_205.1_17114.t1 | gi|149751575|ref|XP_001494865.1| | PREDICTED: protein misato homolog 1 isoform X1 [Equus caballus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_205.1_17114.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_205.1_17114.t1 atgactacaaaagaaattgtttctctacaaataggacattatgcaaatttcgtaggatcccatatatggaatatacagga atcctcgtttgtgtatgatgcatcttcaaatgatgcaaaacaaagggacataaatcatgatgtattgttcagagagggga gaaccagacagggacatgtcacatttacacccaggctagtggcatttgacttaaaaggaagcttacagtctcttaaaagg gaaggaactctttatgaagtatccaaccaatcagaacaagaagaaattcagtggtcaggggatgtaactcttcatcagac ttcctcagcctctgttaacccatacatacaggatctcagaaaagaggaagagagtgtacttcatggagacgaggacacgg acaaatcacagaccatagaggatgtggatatgaaagattcagcacgtacaaataacggctcttcaaagtcttctagcact ggagtagtctttgggaagccttactataaccttgatggcagtgtaaaagtatggtctgattacctgaaggtacatctaca tcctaggtccatacatgtggtggaacagtatgatgagttacatccctttgatgtttacggttgtggggaggaggtgatga gggactatgacactcgtcaggagatggaagaccgaattcaatatttcaccgaagagtgtgaccaacttcaggggttccac gtattactggacacctataacggttttggaggtctgggatcttctattttacaatacctagaggacgagtacagctctaa aggtgttatgacgtttggtttgactccctccagcctcaaagatgacactgcccaactgagagctgacagaatcatcaact cagcaattacatactctaagtgctcttctcatagttccctgtattttcctctttctatagcccagggcttgtggaagaca ataggtcctcccatcccctttcatcacttacagtataagaatatagattaccataccagtgccattcttgctgccgcttt ggagacggcaacgttgccatggagacataactcaccaattcatatcagggacgtcactgataacttctcagtgttgggta gaaagcttgcctcaatcagtacctctcttcccttccctgtgaggacagacggagatttgatgaaatcacttcaaagttta ggagataggttaccatggcaatctgtaactccacatggtcagaatgaattacctccctttatacagtcagtggtattacg aggtgtagatccaagattcactgccagacctacaaatgaaagtatttatcaatcaagtaacacagtagaagatattgtac agacatatctgacggaaaagtttccctcctgtacaaatgggagctgtatatccggagaacgcagtcatgtaaccacacct tttcctcatattttcaataagaatgtcaacaaacaaggatttctatcagataaactcagggaggaatatgaaggtgttga cgctgttcccatgatgacatccatgcagtctacagaggatatgggtaaactactgtacactctacacagctctgctgcta aactgaacatcaagaaacacactcgcttcctggaggcggggctcgaagaggacgagtatagaaacattatacaagaatta caagcgctagaacagtgttataacagtaaagatgacatgggctga |
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Protein
| Protein ID | pfu_aug2.0_205.1_17114.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_205.1_17114.t1 MTTKEIVSLQIGHYANFVGSHIWNIQESSFVYDASSNDAKQRDINHDVLFREGRTRQGHVTFTPRLVAFDLKGSLQSLKR EGTLYEVSNQSEQEEIQWSGDVTLHQTSSASVNPYIQDLRKEEESVLHGDEDTDKSQTIEDVDMKDSARTNNGSSKSSST GVVFGKPYYNLDGSVKVWSDYLKVHLHPRSIHVVEQYDELHPFDVYGCGEEVMRDYDTRQEMEDRIQYFTEECDQLQGFH VLLDTYNGFGGLGSSILQYLEDEYSSKGVMTFGLTPSSLKDDTAQLRADRIINSAITYSKCSSHSSLYFPLSIAQGLWKT IGPPIPFHHLQYKNIDYHTSAILAAALETATLPWRHNSPIHIRDVTDNFSVLGRKLASISTSLPFPVRTDGDLMKSLQSL GDRLPWQSVTPHGQNELPPFIQSVVLRGVDPRFTARPTNESIYQSSNTVEDIVQTYLTEKFPSCTNGSCISGERSHVTTP FPHIFNKNVNKQGFLSDKLREEYEGVDAVPMMTSMQSTEDMGKLLYTLHSSAAKLNIKKHTRFLEAGLEEDEYRNIIQEL QALEQCYNSKDDMG |
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