Gene
| Gene Model ID | pfu_aug2.0_205.1_17117 |
|---|---|
| Locus | scaffold205.1 : 241728 ... 268749 : - |
| To GenomeBrowser | scaffold205.1:241728..268749 |
| Genes list of scaffold | scaffold205.1 |
| Synonym | pfu_aug1.0_261.1_07445 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_205.1_17117.t2 | 1 | 1 | I-set | 93 | 177 | 7.5e-07 | 28.9 | 6.5e-10 | 1.6e-06 | 27.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_205.1_17117.t2 | gi|676423972|ref|XP_009044168.1| | hypothetical protein LOTGIDRAFT_228123 [Lottia gigantea] | 5.0e-22 |
| pfu_aug2.0_205.1_17117.t2 | gi|676479454|ref|XP_009061753.1| | hypothetical protein LOTGIDRAFT_166439 [Lottia gigantea] | 1.0e-18 |
Transcript
| Transcript ID | pfu_aug2.0_205.1_17117.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_205.1_17117.t1 atgagtccccttcggcgttgccgaaaatcagaaaccgaaggcatacaaaatcaggataaaacagaaaccaaagcaaacaa acaaaaacctccaccacatgaaaagaagcggattcccgatatgagagtgagaccaggtgcccaggaagaagtacaattca ccatagttccttcaggacgacacgaggagtcaatattccataatattgtctgtaatgctgaaagttatggactatcatcc aaacgtcaagtaccacctacattcctggagaccggacgacgtaatatcactgtccacaaaggagaccttgcaatactcaa atgtaggattaggaaccttggtccaaaacaggtggcatggcggaagcttaccatgcactaccctcttactgtcgggaagt tgacctttctcccggaagaagatatcagtgtagagtttaatgactttaagaacggtgtgacggaatggaatcttgtgatt aaaagagcggcacccaaacattcgggaacatacgagtgtcaaatcagcgcaaaaaagctctacacgcaccatgtctattt acacgttctagaagaaccagccatacctgagaaagcaatacggatttcaggtacggaatatgtgaatttatacgagaaaa ttaaattaacctgtaatgtgacattccggtctgcaagaccaccctcgatagactggttccacgatggaaatgtgataaaa acacaagatcctaggtggcgcaatagaattgaaataactcgtcgtgtagtacaaaaggagcgctacttgcgtagtgacct caccattgagataagcgcgatgacagatggcggacgttatgtgtgccgtagcattgactacatgaacaacaacattaaca cggcaaatatggacgtaaacgttttaaatattaataaagaagtcatgaagcggggtgaggactctcgccagaaaacatca gaacaaaaagtacggagttgtgcaaatcatttggaatctctagtcagcttctttttattcgttatcattttagtccttag atga |
|
| Transcript ID | pfu_aug2.0_205.1_17117.t2 |
| Definition | - |
>pfu_aug2.0_205.1_17117.t2 atgagtccccttcggcgttgccgaaaatcagaaaccgaaggcatacaaaatcaggataaaacagaaaccaaagcaaacaa acaaaaacctccaccacatgaaaagaagcggattcccgatatgagagtgagaccaggtgcccaggaagaagtacaattca ccatagttccttcaggacgacacgaggagtcaatattccataatattgtctgtaatgctgaaagttatggactatcatcc aaacgtcaagtaccacctacattcctggagaccggacgacgtaatatcactgtccacaaaggagaccttgcaatactcaa atgtaggattaggaaccttggtccaaaacaggtggcatggcggaagcttaccatgcactaccctcttactgtcgggaagt tgacctttctcccggaagaagatatcagtgtagagtttaatgactttaagaacggtgtgacggaatggaatcttgtgatt aaaagagcggcacccaaacattcgggaacatacgagtgtcaaatcagcgcaaaaaagctctacacgcaccatgtctattt acacgttctagaagaaccagccatacctgagaaagcaatacggatttcagttaataaagaagtcatgaagcggggtgagg actctcgccagaaaacatcagaacaaaaagtacggagttgtgcaaatcatttggaatctctagtcagcttctttttattc gttatcattttagtccttagatga |
|
Protein
| Protein ID | pfu_aug2.0_205.1_17117.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_205.1_17117.t1 MSPLRRCRKSETEGIQNQDKTETKANKQKPPPHEKKRIPDMRVRPGAQEEVQFTIVPSGRHEESIFHNIVCNAESYGLSS KRQVPPTFLETGRRNITVHKGDLAILKCRIRNLGPKQVAWRKLTMHYPLTVGKLTFLPEEDISVEFNDFKNGVTEWNLVI KRAAPKHSGTYECQISAKKLYTHHVYLHVLEEPAIPEKAIRISGTEYVNLYEKIKLTCNVTFRSARPPSIDWFHDGNVIK TQDPRWRNRIEITRRVVQKERYLRSDLTIEISAMTDGGRYVCRSIDYMNNNINTANMDVNVLNINKEVMKRGEDSRQKTS EQKVRSCANHLESLVSFFLFVIILVLR |
|
| Protein ID | pfu_aug2.0_205.1_17117.t2 |
| Definition | - |
>pfu_aug2.0_205.1_17117.t2 MSPLRRCRKSETEGIQNQDKTETKANKQKPPPHEKKRIPDMRVRPGAQEEVQFTIVPSGRHEESIFHNIVCNAESYGLSS KRQVPPTFLETGRRNITVHKGDLAILKCRIRNLGPKQVAWRKLTMHYPLTVGKLTFLPEEDISVEFNDFKNGVTEWNLVI KRAAPKHSGTYECQISAKKLYTHHVYLHVLEEPAIPEKAIRISVNKEVMKRGEDSRQKTSEQKVRSCANHLESLVSFFLF VIILVLR |
|