Gene
| Gene Model ID | pfu_aug2.0_205.1_17119 |
|---|---|
| Locus | scaffold205.1 : 354032 ... 371438 : + |
| To GenomeBrowser | scaffold205.1:354032..371438 |
| Genes list of scaffold | scaffold205.1 |
| Synonym | pfu_aug1.0_25671.1_33523 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_205.1_17119.t1 | 3 | 1 | zf-B_box | 291 | 300 | 1.5e-11 | 43.9 | 1.0 | 2600.0 | -1.6 |
| pfu_aug2.0_205.1_17119.t1 | 3 | 2 | zf-B_box | 784 | 824 | 1.5e-11 | 43.9 | 1.3e-07 | 0.00031 | 20.5 |
| pfu_aug2.0_205.1_17119.t1 | 3 | 3 | zf-B_box | 835 | 872 | 1.5e-11 | 43.9 | 7.9e-11 | 2.0e-07 | 30.8 |
| pfu_aug2.0_205.1_17119.t1 | 5 | 1 | NHL | 1116 | 1133 | 1.1e-09 | 37.7 | 0.016 | 39.0 | 4.4 |
| pfu_aug2.0_205.1_17119.t1 | 5 | 2 | NHL | 1150 | 1164 | 1.1e-09 | 37.7 | 0.0022 | 5.4 | 7.1 |
| pfu_aug2.0_205.1_17119.t1 | 5 | 3 | NHL | 1189 | 1223 | 1.1e-09 | 37.7 | 0.22 | 540.0 | 0.8 |
| pfu_aug2.0_205.1_17119.t1 | 5 | 4 | NHL | 1290 | 1311 | 1.1e-09 | 37.7 | 0.00062 | 1.5 | 8.8 |
| pfu_aug2.0_205.1_17119.t1 | 5 | 5 | NHL | 1330 | 1354 | 1.1e-09 | 37.7 | 0.0002 | 0.49 | 10.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_205.1_17119.t1 | gi|676482301|ref|XP_009062654.1| | hypothetical protein LOTGIDRAFT_166946 [Lottia gigantea] | 6.0e-21 |
Transcript
| Transcript ID | pfu_aug2.0_205.1_17119.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_205.1_17119.t1 atgggctgtgcatcgaccaagtcgaagattattcagagtggcttatccagagatgacctacatgaggaatcagaaaaaga agagataatagaggaggtagaggaggaagaagaagaaaatgtagaagagaaggggtctgattttctagaaatgaacgtgg atgatgcaaaagaagagatcaaaatagacgatgaaccagaagatgacaaatataacgctgttttaccgcctataccacac tcagactctgatgatcaaccttcacaagtgacattctttgaaaaatggagaccgatgccgaagaattcggacaacgttag taccgccaggcttgatataagagacatacagctcacagtacctatattggccttaacattagaggatatcgataaaagag caagacaggctagccctgactgtgcaaagagctttcaggcgttaaaccaatacctccttcacgatttgactggtcaaaaa gatcgtgagaagttgactgctagccctgactgtgcaaagagctttcaggcgttaaaccaatacctccttcacgatttgac tggtcaaaaagatcgtgagaagttgactgtccgggctctcctggcttggctgggtaaccagaatatagatgggtaccgtg gtcatccatgtaaccaggacacccctgaaggtttcctcagtcttatagcaaacaaaaggaccatgtactctacattcttt accgtcctttgtcgaagtctggttggacacagtgcaggaggttggatcaaactagaagaaatgggcaaatttcaaggtca tcggaccaagtctgctgctgggactttggtaaatgctttcaaagagtattatttcctaccgaatccaaacgaatttcgtt actattgccatccggatgactcaaaatggcaactgacaaatgaaacactcactcgaaaagagttttttaaactaccatac attttcccgaccttttttgcattgggattaaaaatagtaacggaaaagagctgccttcttatctccaagaatggggaaat agatgttggtattcaggctccaatgaaaaacgctaatacaatagaactgcactacgagctgtttctaaaagaacaatctt cgaacgatgtagaccaaatgttgacggaagctaagaacatgcctcgtctagtgtcaatgatacgctgtgcggactattgg accttcaagatcagctttcccacagagggtacgtataagctgtctatttatggtggaccatataataatccactcagaag ggtctcagactttagaattgactgttcgaaaaggaagcagaattgtcgcctgctaccattcgatcctggtagaacggggt tcggccctggtcctaaaaccgaagataagggactctttgtaccctctcatttgagcggaatggtaccagcatccgtgaat aaaagcatcgaaatttcttttcaaattgatacattactggtaaagacgatgtacgtgaaagccgaacttcaacattacaa ttctgtaaccacaatagaagaaacagagactacggtcttgacgaagcaagtcatgtgtacaatacaaaaccaagaactgc gcatcacaacagagattcggaaagaaggggaatatgctctgtcaatttatacaggaaggaagatggatggaaaagctaat cagaaaaatgccagacaaaaattgaaagatgcagtgagcacccgagtccaccatggcagagacctagagacggtggttac cacaattgcggagtcattgactgcgtgcttcaaacaaaagatatccaagtcagatcctgaactcatggctgctgagcaca aaatggaatatctgaaatgcaaaatggatgttagggatgcaatattaagaagaaatgcaaatgtgacggagaataccata tggaggatcgaaaattcccaatacagccgagcattcagttatgaacttgaaaaactgaaacagcttcatctattacttca agcccttggagcctttacccaagaattaccgtccatagatcgatctataactgaattgagaaacacgccccacgctcgac cagaagtagagtgtgcagtgctggctctacttacccttctttgtgaaaacacgacaaggatggagacttgggaagacatg agggatgctttgaaaatgataaacatcaggacaaaaatgaaacatatagaagaaaaagaaataccaactgacacagccac acgagtcaaatccatattagaaaagtattcattatccgcagttcaacaatcgaatattgcagccggagaaatatacaaat ggatggctgccttgtatcagtggacagtaccttgtatcatatgtgaagatcctgtggagttccattgtaatacatgtgga gatgctctctgctcaaggtgcaaggacaatcatctcaaaagtaatgccacgaagctgcatgatatcgtgccttactcaca acgctctatccctgtcaaaaacactaatgaatgcgagaaacaccatggtcagacatttaatgcatggtgtaaaacctgta acgaacccgtttgtacagaatgcatgttgtctgcagcacacaatagacataattttgggaaattggaagaaaaaattatg gaaaagaggaaagaacttcagagagaattgaatttccaatccagccttttagttaaacatgaatcaacattattttcagt aaaacaaaacagggactcatatgaaaaagaaatacaggttttaagtttagggatcggagctcatgctgacaaaatttgca aagaggtcagaactaaagagaagaaagccatgcagatactacaagatcttagtaacgaccatcaatcgaaatgtattcag tatgaatcttcaatcaaaaaagatatcaaaagatgcaaaaatcaattgaaagaaatagaggatgtccttaggtcaaatga ctcgaccaaaatattaacacataaaccaaaacgtggagagataagtacggatttgacacagactttaaacacccgtcctg ttttcaagccaggagacatatcggtcaacgtgttggagaaagcatttggaagtctgtcagtgatgggaattgaaggtgcg aaggcagattcaggtcctatctccagtactgcttctaagtcaaacgcctcagtagcaatatctacattgttaacggagaa tgatcttgatcctgctataacctgtgtggatgcaaatcacgcctgggttgaaaccagtgatgcgaccctcaagctaatcg caagggatggaagtgtaatgaacaccatcctcttcgacttcagtttgaggttgatgaccttgagtgcggaaggtgatctg ctgttgtgtgattttagcaacaaatgcatcaggtgtctacgtaaaggaagcaatgtcatgtccattctattccgcacaga gactataccccatgatatctgctgcttgtcgtctggtgaaattttggtttctagtttcgctgaacgcagaatgactatat acagcagaactggacatgttgtgaaggaggtggacagcaaacttttccgttatccattttccgtgacacagcacaaagat agtaaacttttgtacgtgagcgataaaagaggaaggcaactgtcggcacccggtagagtcgtctgctttnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggaatgaacaacaaaaagatgtatcagtacactggcagg aaaaatgctctcgactttactccttgttgtttatgtgttgatggtcgtggtaacgtaatcgtttccaattttgagagcaa ctctgtccacatcctgagcaaagagctcaactttctgcaatatctgatgccaaagcaatctgtgaccagacctgtctgca ttgatgttgatggcgacggacatgcttgggttggagaaagtcaaactcatgcaatacagattgtgaaataccgtgtgaaa taa |
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Protein
| Protein ID | pfu_aug2.0_205.1_17119.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_205.1_17119.t1 MGCASTKSKIIQSGLSRDDLHEESEKEEIIEEVEEEEEENVEEKGSDFLEMNVDDAKEEIKIDDEPEDDKYNAVLPPIPH SDSDDQPSQVTFFEKWRPMPKNSDNVSTARLDIRDIQLTVPILALTLEDIDKRARQASPDCAKSFQALNQYLLHDLTGQK DREKLTASPDCAKSFQALNQYLLHDLTGQKDREKLTVRALLAWLGNQNIDGYRGHPCNQDTPEGFLSLIANKRTMYSTFF TVLCRSLVGHSAGGWIKLEEMGKFQGHRTKSAAGTLVNAFKEYYFLPNPNEFRYYCHPDDSKWQLTNETLTRKEFFKLPY IFPTFFALGLKIVTEKSCLLISKNGEIDVGIQAPMKNANTIELHYELFLKEQSSNDVDQMLTEAKNMPRLVSMIRCADYW TFKISFPTEGTYKLSIYGGPYNNPLRRVSDFRIDCSKRKQNCRLLPFDPGRTGFGPGPKTEDKGLFVPSHLSGMVPASVN KSIEISFQIDTLLVKTMYVKAELQHYNSVTTIEETETTVLTKQVMCTIQNQELRITTEIRKEGEYALSIYTGRKMDGKAN QKNARQKLKDAVSTRVHHGRDLETVVTTIAESLTACFKQKISKSDPELMAAEHKMEYLKCKMDVRDAILRRNANVTENTI WRIENSQYSRAFSYELEKLKQLHLLLQALGAFTQELPSIDRSITELRNTPHARPEVECAVLALLTLLCENTTRMETWEDM RDALKMINIRTKMKHIEEKEIPTDTATRVKSILEKYSLSAVQQSNIAAGEIYKWMAALYQWTVPCIICEDPVEFHCNTCG DALCSRCKDNHLKSNATKLHDIVPYSQRSIPVKNTNECEKHHGQTFNAWCKTCNEPVCTECMLSAAHNRHNFGKLEEKIM EKRKELQRELNFQSSLLVKHESTLFSVKQNRDSYEKEIQVLSLGIGAHADKICKEVRTKEKKAMQILQDLSNDHQSKCIQ YESSIKKDIKRCKNQLKEIEDVLRSNDSTKILTHKPKRGEISTDLTQTLNTRPVFKPGDISVNVLEKAFGSLSVMGIEGA KADSGPISSTASKSNASVAISTLLTENDLDPAITCVDANHAWVETSDATLKLIARDGSVMNTILFDFSLRLMTLSAEGDL LLCDFSNKCIRCLRKGSNVMSILFRTETIPHDICCLSSGEILVSSFAERRMTIYSRTGHVVKEVDSKLFRYPFSVTQHKD SKLLYVSDKRGRQLSAPGRVVCFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMNNKKMYQYTGR KNALDFTPCCLCVDGRGNVIVSNFESNSVHILSKELNFLQYLMPKQSVTRPVCIDVDGDGHAWVGESQTHAIQIVKYRVK |
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