Gene
| Gene Model ID | pfu_aug2.0_205.1_17120 |
|---|---|
| Locus | scaffold205.1 : 378112 ... 380062 : + |
| To GenomeBrowser | scaffold205.1:378112..380062 |
| Genes list of scaffold | scaffold205.1 |
| Synonym | pfu_aug1.0_57084.1_34611 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_205.1_17120.t1 | 3 | 1 | zf-B_box | 10 | 50 | 3.3e-10 | 39.6 | 3.3e-08 | 8.0e-05 | 22.4 |
| pfu_aug2.0_205.1_17120.t1 | 3 | 2 | zf-B_box | 61 | 98 | 3.3e-10 | 39.6 | 5.4e-11 | 1.3e-07 | 31.3 |
| pfu_aug2.0_205.1_17120.t1 | 6 | 1 | NHL | 284 | 291 | 7.1e-08 | 32.0 | 3.8 | 9300.0 | -3.1 |
| pfu_aug2.0_205.1_17120.t1 | 6 | 2 | NHL | 323 | 343 | 7.1e-08 | 32.0 | 0.0013 | 3.2 | 7.8 |
| pfu_aug2.0_205.1_17120.t1 | 6 | 3 | NHL | 360 | 375 | 7.1e-08 | 32.0 | 0.03 | 75.0 | 3.5 |
| pfu_aug2.0_205.1_17120.t1 | 6 | 4 | NHL | 411 | 433 | 7.1e-08 | 32.0 | 0.37 | 930.0 | 0.1 |
| pfu_aug2.0_205.1_17120.t1 | 3 | 3 | zf-B_box | 437 | 448 | 3.3e-10 | 39.6 | 5.0 | 12000.0 | -3.8 |
| pfu_aug2.0_205.1_17120.t1 | 6 | 5 | NHL | 456 | 477 | 7.1e-08 | 32.0 | 0.0054 | 13.0 | 5.9 |
| pfu_aug2.0_205.1_17120.t1 | 6 | 6 | NHL | 494 | 520 | 7.1e-08 | 32.0 | 3.6e-05 | 0.088 | 12.7 |
Transcript
| Transcript ID | pfu_aug2.0_205.1_17120.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_205.1_17120.t1 atggctgccttgtatcaatggtcagtaccttgtattatatgtgaagatcctgtggagttccattgtaatacatgtgggga tgttctctgctcaaggtgcaaggacaatcatctcaaaagcaatgcaacgaagctgcatgatatcgtgccttactcacaac gctctatccctgtcaaaaacactaatgaatgcgagaaacaccatggtcagatatttaatgcatggtgtaaaacctgtaac gaacccgtttgtacagaatgcatgttgtctgcagcacacaacagacataattttggaaaattggaagaaaaaattatgaa aaagagaaaagaattacaaagagatttcgatcttcaatccagccttttagttcaacatgaatccaagttatattctgtaa aacggatgaggggttcatacgaaaaagaaatacaggttttatgtctagggatcggtgctcaagctgacaaaatttgcaaa gaagtcagggtcattgagaagaaaaccatgcagaaactagaaggtcttggtacagatcatcaatcaaaatttattcagtg tgagtctaccatcaaagaagatatcaaaagatgcaaaaatgaattgaaagaaatagaagatgtgctaaggtcgaatgact taacaaaaatattaacacataaatcgaaacttggagagataagtacagatttgacagagaatttaaacacccgtcctgtt ttcaagccaggagaaatatcagttaatgtgttggagagagtatttggaagtctgtcagtgatgggaagtgaatctgcttc agtagcaatatctaaattgtcaatagaaaaggattctgatcctgctatagtatgtgtggatgcaaatcatgcctgggttg aaactagtgacatgaccctcaagctaattaccagggacggaagtgtaaagaacatcatccacttcgactttatcttgcca gtcatgaccattgatgcggaaggtgatctgctgttgtgtgattttagcaacaaatgcatcaggtgtctacctaaaggaag caacgaaatgtctattctcttccatacagagagtccaccccataatatatgctgcttgtcgtctggtgatatcttagttt ccagtacctctgaacggagaatgacaatttacaacagaagaggtcatgtcgtcaaggaagttgacaacaaacttttccat tatccaatgacagtgacacagcacaaggacactaaactgttgtatgttagcgacaaaacagggatgcaactctcggcatc aggtagagtcgtctgttttgggacgaacaacaaaaagatgtttcagtacacttgtagggaaaattctctcgactttactc cttgctgtgtatgtgttgatggtcgtggtttcatactcgtttccaattttaagagtaactctgtccacatcctgagccaa gagctcaagttcctgcagtatctgacgccaaagcaagctttgaccagacctgtctgtgttgatgtggatggcgacggaca tgcttgggttggagaatttcaaactcatgcaatacaaattgtgaaataccatgtgaaataa |
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Protein
| Protein ID | pfu_aug2.0_205.1_17120.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_205.1_17120.t1 MAALYQWSVPCIICEDPVEFHCNTCGDVLCSRCKDNHLKSNATKLHDIVPYSQRSIPVKNTNECEKHHGQIFNAWCKTCN EPVCTECMLSAAHNRHNFGKLEEKIMKKRKELQRDFDLQSSLLVQHESKLYSVKRMRGSYEKEIQVLCLGIGAQADKICK EVRVIEKKTMQKLEGLGTDHQSKFIQCESTIKEDIKRCKNELKEIEDVLRSNDLTKILTHKSKLGEISTDLTENLNTRPV FKPGEISVNVLERVFGSLSVMGSESASVAISKLSIEKDSDPAIVCVDANHAWVETSDMTLKLITRDGSVKNIIHFDFILP VMTIDAEGDLLLCDFSNKCIRCLPKGSNEMSILFHTESPPHNICCLSSGDILVSSTSERRMTIYNRRGHVVKEVDNKLFH YPMTVTQHKDTKLLYVSDKTGMQLSASGRVVCFGTNNKKMFQYTCRENSLDFTPCCVCVDGRGFILVSNFKSNSVHILSQ ELKFLQYLTPKQALTRPVCVDVDGDGHAWVGEFQTHAIQIVKYHVK |
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