Gene
| Gene Model ID | pfu_aug2.0_205.1_17121 |
|---|---|
| Locus | scaffold205.1 : 387372 ... 404387 : + |
| To GenomeBrowser | scaffold205.1:387372..404387 |
| Genes list of scaffold | scaffold205.1 |
| Synonym | pfu_aug1.0_2864.1_44513 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| uncharacterized protein loc101850625 isoform x2 | GO:0097159 GO:1901363 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_205.1_17121.t1 | 1 | 1 | OST-HTH | 5 | 67 | 2.1e-09 | 37.0 | 1.4e-12 | 3.4e-09 | 36.3 |
| pfu_aug2.0_205.1_17121.t1 | 1 | 1 | RRM_1 | 144 | 197 | 1.0e-09 | 37.8 | 9.7e-13 | 2.4e-09 | 36.6 |
| pfu_aug2.0_205.1_17121.t1 | 1 | 1 | RRM_6 | 144 | 198 | 3.1e-09 | 36.6 | 2.4e-12 | 5.8e-09 | 35.7 |
| pfu_aug2.0_205.1_17121.t1 | 1 | 1 | RRM_5 | 152 | 202 | 1.0e-10 | 41.3 | 7.3e-14 | 1.8e-10 | 40.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_205.1_17121.t1 | gi|676429697|ref|XP_009045685.1| | hypothetical protein LOTGIDRAFT_171244 [Lottia gigantea] | 7.0e-38 |
| pfu_aug2.0_205.1_17121.t1 | gi|260791599|ref|XP_002590816.1| | hypothetical protein BRAFLDRAFT_125731 [Branchiostoma floridae] | 8.0e-17 |
| pfu_aug2.0_205.1_17121.t1 | gi|524869704|ref|XP_005091643.1| | PREDICTED: uncharacterized protein LOC101850625 isoform X2 [Aplysia californica] | 4.0e-15 |
| pfu_aug2.0_205.1_17121.t1 | gi|524869702|ref|XP_005091642.1| | PREDICTED: uncharacterized protein LOC101850625 isoform X1 [Aplysia californica] | 4.0e-15 |
| pfu_aug2.0_205.1_17121.t1 | gi|260789014|ref|XP_002589543.1| | hypothetical protein BRAFLDRAFT_232620 [Branchiostoma floridae] | 5.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_205.1_17121.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_205.1_17121.t1 atggcaagtgtaccagataatataaagaagaatgtacgagcagttttactgtccaaacaagggggtgtactggtcagtga ctttaccaaggactataagagtcttctcaaagaacagcttcggtttaaggatctgggcttctctacactaaaagaactta ttgatgcaataccagaggttgtaaggttagagtttgatgacggaatgatggcgtataaaatgttcggtataggagaccca aacacgtatatgtcacttagtgcaaaaagggcggaaggacgtaataggggtaaggcctctcccaccaaatcaccgtcctc tagtacgacaatgaacggtacttgttcccggcctgacctcgaggacaagctaataccaaacatgcgaggccacatctctg tgtgttatcccagggacagagaacttgatgatgcttcagtcgatgatgttaaggagaaattttcacaatttggagaggtt gctgaagtacacatgattcctaaatttgcgtttgttggctttagtacacagtctgatgctgaggaaatgatcagtaagct acatggttatcaatggaaaggcagggcgctgaactgtcgtctgagtagagatgataaaccacagacctccacacaggata gtagtaagtaa |
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Protein
| Protein ID | pfu_aug2.0_205.1_17121.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_205.1_17121.t1 MASVPDNIKKNVRAVLLSKQGGVLVSDFTKDYKSLLKEQLRFKDLGFSTLKELIDAIPEVVRLEFDDGMMAYKMFGIGDP NTYMSLSAKRAEGRNRGKASPTKSPSSSTTMNGTCSRPDLEDKLIPNMRGHISVCYPRDRELDDASVDDVKEKFSQFGEV AEVHMIPKFAFVGFSTQSDAEEMISKLHGYQWKGRALNCRLSRDDKPQTSTQDSSK |
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