Gene
| Gene Model ID | pfu_aug2.0_2051.1_05385 |
|---|---|
| Locus | scaffold2051.1 : 8236 ... 12312 : + |
| To GenomeBrowser | scaffold2051.1:8236..12312 |
| Genes list of scaffold | scaffold2051.1 |
| Synonym | pfu_aug1.0_33215.1_48113 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2051.1_05385.t1 | 1 | 1 | zf-C2H2_2 | 37 | 89 | 9.7e-06 | 25.6 | 1.7e-09 | 1.2e-05 | 25.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2051.1_05385.t1 | gi|657748469|ref|XP_008309564.1| | PREDICTED: zinc finger protein 277 [Cynoglossus semilaevis] | 3.0e-22 |
| pfu_aug2.0_2051.1_05385.t1 | gi|657565474|ref|XP_008286038.1| | PREDICTED: zinc finger protein 277 [Stegastes partitus] | 5.0e-21 |
| pfu_aug2.0_2051.1_05385.t1 | gi|551520859|ref|XP_005811920.1| | PREDICTED: zinc finger protein 277-like, partial [Xiphophorus maculatus] | 3.0e-20 |
| pfu_aug2.0_2051.1_05385.t1 | gi|410907587|ref|XP_003967273.1| | 4.0e-20 |
Transcript
| Transcript ID | pfu_aug2.0_2051.1_05385.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2051.1_05385.t1 atgagaaaaatcggaacagtcagtgaagcatcgaaaagtcgacactcgtcaaaattaaaattcaggtggttcaacaaagt gcaacagtcaccgttcacttcaagagtaaaggtacatttaggaatatgtatgggatgtggcgagacttttggcggtaaat cggagctcgtagatcacatgcatcaacttggccatatcacagagattcctgatatatcaatatgggatcaaccacaatat ttcttccctacatatgaaaacgacaacctcttgtgtcaactggacgacacagcagatgatgggtgtgatgtcatagatca ccatggcaacctaagagttatagcagaggactttccagttgtagagaccattctctcagaagaaagtgtgcgaaaaaatg ttttgggaacttga |
|
Protein
| Protein ID | pfu_aug2.0_2051.1_05385.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2051.1_05385.t1 MRKIGTVSEASKSRHSSKLKFRWFNKVQQSPFTSRVKVHLGICMGCGETFGGKSELVDHMHQLGHITEIPDISIWDQPQY FFPTYENDNLLCQLDDTADDGCDVIDHHGNLRVIAEDFPVVETILSEESVRKNVLGT |
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