Gene
| Gene Model ID | pfu_aug2.0_2051.1_05391 |
|---|---|
| Locus | scaffold2051.1 : 95731 ... 99435 : - |
| To GenomeBrowser | scaffold2051.1:95731..99435 |
| Genes list of scaffold | scaffold2051.1 |
| Synonym | pfu_aug1.0_33511.1_40917 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2051.1_05391.t1 | 2 | 1 | zf-B_box | 13 | 49 | 4.1e-09 | 36.1 | 1.7e-12 | 4.1e-09 | 36.1 |
| pfu_aug2.0_2051.1_05391.t1 | 2 | 2 | zf-B_box | 447 | 454 | 4.1e-09 | 36.1 | 1.2 | 3000.0 | -1.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2051.1_05391.t1 | gi|585647823|ref|XP_006814116.1| | PREDICTED: E3 ubiquitin-protein ligase TRIM71-like [Saccoglossus kowalevskii] | 3.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_2051.1_05391.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2051.1_05391.t1 atggcttctagtttacacaagtttcaagttgttctgagactttgtgaagatcacaaccaaaaggaactccatgcctactg taaaacttgtgagaagaaaatatgttcatcgtgcataaagggagaccataatgaacacgactgggaactgatatctgaga tactgagggagaaaaaacgcagccttccagacgaatgtaaagaaatacatgcgaaacaacttcctgatttgagaaaggaa atatattgcttcgatcgaaaaatacaaaaagaggatgccgaattagaagataacaaaactgttttgaatgattccaggaa acgttacatcgacacaatcaacaagttatttgatgatacaatagatgaatgccaacagaaacacgatgaagccactcaga tatataaaaacaaacgtgacgcgttgaaacagaaagtagaatacctgaagataatgacaacagctctagacaaggatatc aatacattacctgaccatgacattctggacatggagaaagagatgagagatgaacttggaaaggctatctcttacaacgc tgataagtacacatgtacgacgatgtatgttcccgggcaaattgatacagaagctctgaagagcatgataggtgaaatac acagcgtgtctgtggaagaaaagtatgatattgacaattacacaaaaaccatcatgtccatcaatactgtttccgacaca aatgcttggatcaggaaatctaaagacaagtttgcaaagctactcaatagaactggagaagaattgaagacaatgatcac cccttgcgatggcattagtatcatgaagagtggagaatttgtacttggtgacgaaaacaacggcataatttcagttttga caaaggaagaaaatgttatcagaacaatagatataaaaccattgcgttttatcaggatcagtaagacagagaatgatgac atactgcttactttgagggatagtggtgatctctacaatctactaccgaccagccgccgtgttgtccagcgtatgactct cacagggaaggtactccacacgtacgagttcaaggaagatggtaaaacaaggctgtttacatggccgatcaggacattgg agcgcaagaacacggacatatgtgttgtaaacgtgcttagtagggaaaatggagaacttgtcgtgctacataaagatgga agtgtaaaatttacgtacaaaggaaatgggctagattctgaaaggttccttccattagatgttgaatgtgattccaagtg taaaatcatgtttacagaaatacatagtaatgcagtccacatgctaaacgctgaagggatgtttctatgtacattatgtc aatatactcagataaatccctttgtgatttctctccacggtgataatctctggtgtggatttcatgaaggaagagttaag gtgctcaaatatacatcgaattaa |
|
Protein
| Protein ID | pfu_aug2.0_2051.1_05391.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2051.1_05391.t1 MASSLHKFQVVLRLCEDHNQKELHAYCKTCEKKICSSCIKGDHNEHDWELISEILREKKRSLPDECKEIHAKQLPDLRKE IYCFDRKIQKEDAELEDNKTVLNDSRKRYIDTINKLFDDTIDECQQKHDEATQIYKNKRDALKQKVEYLKIMTTALDKDI NTLPDHDILDMEKEMRDELGKAISYNADKYTCTTMYVPGQIDTEALKSMIGEIHSVSVEEKYDIDNYTKTIMSINTVSDT NAWIRKSKDKFAKLLNRTGEELKTMITPCDGISIMKSGEFVLGDENNGIISVLTKEENVIRTIDIKPLRFIRISKTENDD ILLTLRDSGDLYNLLPTSRRVVQRMTLTGKVLHTYEFKEDGKTRLFTWPIRTLERKNTDICVVNVLSRENGELVVLHKDG SVKFTYKGNGLDSERFLPLDVECDSKCKIMFTEIHSNAVHMLNAEGMFLCTLCQYTQINPFVISLHGDNLWCGFHEGRVK VLKYTSN |
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