Gene
| Gene Model ID | pfu_aug2.0_2055.1_18663 |
|---|---|
| Locus | scaffold2055.1 : 60043 ... 75305 : - |
| To GenomeBrowser | scaffold2055.1:60043..75305 |
| Genes list of scaffold | scaffold2055.1 |
| Synonym | pfu_aug1.0_4739.1_37957 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2055.1_18663.t1 | 3 | 1 | zf-C2H2_jaz | 4 | 26 | 2.1e-06 | 27.6 | 9.0e-06 | 0.019 | 15.0 |
| pfu_aug2.0_2055.1_18663.t1 | 3 | 1 | zf-C2H2 | 6 | 28 | 3.4e-06 | 27.0 | 4.5e-06 | 0.0095 | 16.2 |
| pfu_aug2.0_2055.1_18663.t1 | 3 | 1 | zf-C2H2_4 | 6 | 28 | 5.0e-06 | 26.4 | 5.1e-05 | 0.11 | 12.9 |
| pfu_aug2.0_2055.1_18663.t1 | 3 | 2 | zf-C2H2_jaz | 36 | 56 | 2.1e-06 | 27.6 | 1.1e-05 | 0.023 | 14.8 |
| pfu_aug2.0_2055.1_18663.t1 | 3 | 2 | zf-C2H2 | 36 | 58 | 3.4e-06 | 27.0 | 1.6e-08 | 3.4e-05 | 23.9 |
| pfu_aug2.0_2055.1_18663.t1 | 3 | 2 | zf-C2H2_4 | 36 | 58 | 5.0e-06 | 26.4 | 8.2e-09 | 1.7e-05 | 24.7 |
| pfu_aug2.0_2055.1_18663.t1 | 3 | 3 | zf-C2H2_jaz | 385 | 399 | 2.1e-06 | 27.6 | 0.49 | 1000.0 | 0.0 |
| pfu_aug2.0_2055.1_18663.t1 | 3 | 3 | zf-C2H2 | 385 | 401 | 3.4e-06 | 27.0 | 5.5 | 12000.0 | -3.0 |
| pfu_aug2.0_2055.1_18663.t1 | 3 | 3 | zf-C2H2_4 | 388 | 401 | 5.0e-06 | 26.4 | 2.1 | 4500.0 | -1.6 |
Transcript
| Transcript ID | pfu_aug2.0_2055.1_18663.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2055.1_18663.t1 atggatggacaactagtatgtgagcactgcggaaaacaagtttcttcaaagagaaacttaaataagcatattcatgagag acactctgcatcactttctgtgctaatttgcagtttttgccagaaaccatttaagaggagaaataacttaaaacgacatt tgaggacagttcatgattccgaagagaagatggaagctaagagacgcaaaatggactataataattatgcggactctagg aagactgtgtatgtatcattactaagtgacctgcacgaggacatttcttcggaagaggaggaagacacaaggattgtgca atatgaaggtgtatcggacgatgataatagcattggcgagatgttggccaatgcatccgatgtgaataccaatgacatcc cggacgatatacaagatcgtataatcgatgcattgcaccaggaagaagataagaggatagttgtaaattcgcgcgacagt gatagtgacactgtgatatatgtggatgcgtacaaaaacgatcatgttcgtgaaaatgaggacgatacccgcaatgagta ccacagtgaaaatcaggacgatacccagagtgagtgccatactgaagctcatgacgatacccagcccgggtactcgcgat cgtgtgatgacgactgtgaccttaacaataatagcgaaaaagacgctgatgtggatattggaagtgtagatttcgtggct acgacactagagattctcgatgaaattaacattcacctgcagaatagaaacgtgaaagttgtgagaggagatctaaactg gggcaaacatatatcgaacatcaccagtaaagcaaatcagacccttggattcctacaacgtaacctccatatatcatcta gatcagttaaagaaagagcatacatgtccttagttcgaccacaactggaatactcatcaacagtgtgggacccatatcaa caaggccacatagatatgctggagaaagtgcaaagaagagcagcacggtatgtcatggggaaatatagagatagatctag cgtaggagaaatgatacaacatctggaatggaaaagtttaaaagcaaggaggaaagaggctagactctccatggtgtaca agatagttaacaacaaagtagccattgatcccgataaatactttaagaagccatctaggagatccaggcacatgcaccat catgcctatgcagttccatcagcaaccaaggacagtaggaaatggtcatactttctcaacaccatccgagattggaacag cctacctccggacatagctgcctcaaagtcacttgagatattcaagtctcagtgcgcagactccagagtgggcgggtcat gtcaagaagacacagccgggatgcttgaaactcataaggctataaatgatactagcaatgattgtactgatatggataaa tgcggatacttcaaaaactgtagcaacggacaaaattactgtgtaatggaaaggctggaggaacaaggacagatccacgc atttctcagagagtgtggaccaccaacattaaacaaaaacttgtctttttttcctggaatcacgccgactaactatacgt catgtgttatatacggcgagaagatgatatactgtgtaacattatgtgaaaccgacatgtgtaacggtccacagaaacca gacacatcagatggtacttcctgttccgtcatgaccaatgcgcatgccctgatgttgttttcaatatcaatcatcacgaa gaatttctttatgacattatga |
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Protein
| Protein ID | pfu_aug2.0_2055.1_18663.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2055.1_18663.t1 MDGQLVCEHCGKQVSSKRNLNKHIHERHSASLSVLICSFCQKPFKRRNNLKRHLRTVHDSEEKMEAKRRKMDYNNYADSR KTVYVSLLSDLHEDISSEEEEDTRIVQYEGVSDDDNSIGEMLANASDVNTNDIPDDIQDRIIDALHQEEDKRIVVNSRDS DSDTVIYVDAYKNDHVRENEDDTRNEYHSENQDDTQSECHTEAHDDTQPGYSRSCDDDCDLNNNSEKDADVDIGSVDFVA TTLEILDEINIHLQNRNVKVVRGDLNWGKHISNITSKANQTLGFLQRNLHISSRSVKERAYMSLVRPQLEYSSTVWDPYQ QGHIDMLEKVQRRAARYVMGKYRDRSSVGEMIQHLEWKSLKARRKEARLSMVYKIVNNKVAIDPDKYFKKPSRRSRHMHH HAYAVPSATKDSRKWSYFLNTIRDWNSLPPDIAASKSLEIFKSQCADSRVGGSCQEDTAGMLETHKAINDTSNDCTDMDK CGYFKNCSNGQNYCVMERLEEQGQIHAFLRECGPPTLNKNLSFFPGITPTNYTSCVIYGEKMIYCVTLCETDMCNGPQKP DTSDGTSCSVMTNAHALMLFSISIITKNFFMTL |
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