Gene
| Gene Model ID | pfu_aug2.0_2055.1_18666 |
|---|---|
| Locus | scaffold2055.1 : 100256 ... 103272 : + |
| To GenomeBrowser | scaffold2055.1:100256..103272 |
| Genes list of scaffold | scaffold2055.1 |
| Synonym | pfu_aug1.0_4955.1_67100 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2055.1_18666.t1 | 1 | 1 | DC_STAMP | 504 | 694 | 0.0 | 169.5 | 0.0 | 0.0 | 168.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2055.1_18666.t1 | gi|701348090|ref|XP_009994573.1| | PREDICTED: DC-STAMP domain-containing protein 2 [Chaetura pelagica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2055.1_18666.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2055.1_18666.t1 atgttttcggtcctcgtggaatatgaaccttccaggaaaggcgatcttcttttgacagtaggtgaccgagtggacaaagt gaaggacattggtcatggttggcttttaggacggaatgtcaccacgggcaaaaaaggagcttttcctgatggctgtattg accgtgacactactgtatctggtgccattattcgtcagttctcaagaaagccacggacggtaagatcggccaaggattca aggatgactgttattaaaagtgattcaaacaatattccaggaaaaacagacggagaatgcagcgaagatgcggcatggaa agcagcccatgagcatcatggtttacagagtgatgataagaggaggaaattggtcttcttcacaaacttatttttgcgga ttgcttcagcaataatatgtagtggtattgtgtacctgttgcttgtgtacagttttgggtataggtttgccacagcgggc tatgttgttattggggtgtttatgttccttctccttgggcttgtgctgtctcccctcataagatgcgttgtccttgtcat ggtaacaaacatgttcacaaacagaggtcgtggtattattctatcaatcatcacaggactattactatccgggccatcta tgaatgtctcatataacaccgaggaagtaagtcaaagtctgggatgtaccgccgatttaatctacaatcaaaccagcgca cttcgcaagcaattagaagaaccaataagaaacctgcgacaaaaactccttgaatatatgagaaatctacaagaaatagt aaacaccataagaagcactatggagccactagccgatagtatcacaacgttttccattgctgtaaggagttctgtcgaag gtctccaacaacttgctaaacaatgtgacgagggactgagacgagcagaaaatgaatgtacaaatggcaataatagggca aggaaaacctgtaaggattcaatcaacagaatcgatcccacagacactataaccgactctataacagacacggtagagga tattattggtggtttgggaaggaggaaaaagagggcaacaaacacgacattggtgggacaggcaattactcggacattgg tcaaacgcagagctctcagctctatatgtaatatattcgacgtcagtagaggtgtgtgtggagcactgggtagcgtttcc accatctgtaatccgcttaatctcatatccaacacaatgatgagggcagcaaaatctgctttagatgccattaaagaagt gacggagttctttgattacagaattgtaaatgatgttgatttgtctggttccgctaccgcatcaaagaatgcctcaacca tagtaaacgaaatcagagaagaaatcatgtcaaaaacagaagcaattcgctatatcttctcgataataaatagaatactg tctacttctttgctgtttttgttcttcacctccctgaattatgtgctgaaataccgtaaaaagatgagttacgacaacag atatataaccacggcctttgttcagcttgatgaggactgtaaacgtaaaggtcaggagactgtattacctctacgtaaaa aagaaaagaagaaatacatgtttacaacatctaagggtttgtctatgatcgaactttctggtcttaaagagtcggcagca ttccttcttcatcactttgtcagtgccgtaattatcattgcttttgactatatattgtattatgtgttggcactgataca acaatacgctatggtagctctgaccgtagaaggagtcaacaccatagatgtagaggttgaagggaatggagtattcacca tctttctacgtactatgatttctacaatagatcttaacagcacatacagcgttgatttcaactttaccacatgcttaccg aatccatcaagtcctggtgtcttcagcaactccattatcatgtctctgtatattttagcattgtttatgctgatcatgca ggcttatggttcccgtttgaggagaaagatcgcatcttcctattatcctgaacaagaaaagagtagaattctgtatcttc acgacaagatcatttgcgatagaatcgcgtttaaagctttgatgaaggatcaagtttacaggagaagaaaagagaatgct gtacgaggacacataagaccacgtggttgttttacggacaaactgtcttgcttattcggtttgtgtgacgtcattcttcc ggagaaacgatcatgtgattcgtgtgatcttatcgctgggagacggagattgttcattaaatgtcaaaacagactatgta atgcaatattttgccaggaatgtgtcgatgttatggaaggaacttgttttgtatgtgatgaacgttttgaaatacgaggc acttaa |
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Protein
| Protein ID | pfu_aug2.0_2055.1_18666.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2055.1_18666.t1 MFSVLVEYEPSRKGDLLLTVGDRVDKVKDIGHGWLLGRNVTTGKKGAFPDGCIDRDTTVSGAIIRQFSRKPRTVRSAKDS RMTVIKSDSNNIPGKTDGECSEDAAWKAAHEHHGLQSDDKRRKLVFFTNLFLRIASAIICSGIVYLLLVYSFGYRFATAG YVVIGVFMFLLLGLVLSPLIRCVVLVMVTNMFTNRGRGIILSIITGLLLSGPSMNVSYNTEEVSQSLGCTADLIYNQTSA LRKQLEEPIRNLRQKLLEYMRNLQEIVNTIRSTMEPLADSITTFSIAVRSSVEGLQQLAKQCDEGLRRAENECTNGNNRA RKTCKDSINRIDPTDTITDSITDTVEDIIGGLGRRKKRATNTTLVGQAITRTLVKRRALSSICNIFDVSRGVCGALGSVS TICNPLNLISNTMMRAAKSALDAIKEVTEFFDYRIVNDVDLSGSATASKNASTIVNEIREEIMSKTEAIRYIFSIINRIL STSLLFLFFTSLNYVLKYRKKMSYDNRYITTAFVQLDEDCKRKGQETVLPLRKKEKKKYMFTTSKGLSMIELSGLKESAA FLLHHFVSAVIIIAFDYILYYVLALIQQYAMVALTVEGVNTIDVEVEGNGVFTIFLRTMISTIDLNSTYSVDFNFTTCLP NPSSPGVFSNSIIMSLYILALFMLIMQAYGSRLRRKIASSYYPEQEKSRILYLHDKIICDRIAFKALMKDQVYRRRKENA VRGHIRPRGCFTDKLSCLFGLCDVILPEKRSCDSCDLIAGRRRLFIKCQNRLCNAIFCQECVDVMEGTCFVCDERFEIRG T |
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