Gene
| Gene Model ID | pfu_aug2.0_2055.1_18667 |
|---|---|
| Locus | scaffold2055.1 : 105094 ... 116965 : - |
| To GenomeBrowser | scaffold2055.1:105094..116965 |
| Genes list of scaffold | scaffold2055.1 |
| Synonym | pfu_aug1.0_4955.1_67101 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2055.1_18667.t1 | 2 | 1 | SH3_2 | 4 | 55 | 8.4e-09 | 34.7 | 5.2e-06 | 0.0071 | 15.8 |
| pfu_aug2.0_2055.1_18667.t1 | 2 | 1 | SH3_1 | 6 | 51 | 3.6e-13 | 48.6 | 8.2e-08 | 0.00011 | 21.4 |
| pfu_aug2.0_2055.1_18667.t1 | 2 | 1 | SH3_9 | 8 | 55 | 5.0e-15 | 54.8 | 1.1e-09 | 1.5e-06 | 27.6 |
| pfu_aug2.0_2055.1_18667.t1 | 2 | 1 | DC_STAMP | 560 | 751 | 0.0 | 289.8 | 0.0 | 6.69821e-43 | 146.5 |
| pfu_aug2.0_2055.1_18667.t1 | 2 | 2 | SH3_2 | 856 | 907 | 8.4e-09 | 34.7 | 2.2e-06 | 0.003 | 16.9 |
| pfu_aug2.0_2055.1_18667.t1 | 2 | 2 | SH3_1 | 857 | 903 | 3.6e-13 | 48.6 | 7.4e-09 | 1.0e-05 | 24.8 |
| pfu_aug2.0_2055.1_18667.t1 | 2 | 2 | SH3_9 | 858 | 907 | 5.0e-15 | 54.8 | 9.1e-09 | 1.2e-05 | 24.7 |
| pfu_aug2.0_2055.1_18667.t1 | 2 | 2 | DC_STAMP | 1365 | 1556 | 0.0 | 289.8 | 2.8026e-45 | 4.30058e-42 | 143.9 |
Transcript
| Transcript ID | pfu_aug2.0_2055.1_18667.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2055.1_18667.t1 atggcgacatataaagcaatcgtagcacacgaagaaaacaagaaaggggagctaagtatagaaatagatgatgatgttga tcgaattaaagacatcgggaatggatgggttctcggtcgaaacgttcgcactggaaaaacaggactttttcctgaaaatt gtttagatagaaataccagtgtaacgggatctattgtgcgtcgcgttagtaagaggaaaccaagtttaccatccaagggt ccaaaggtacgacttttgttggacaatcttaaggaatctgtttccaataatgtccacttacctttgaaaaaggcacctgc agaaagccttaagaacagtcgagaagaacaatatagttctagcgaagaagtccctagaaaggatagaaatattgaacgtt ctgtggattatttgaaatatgaatatgagaagattcagcaacaagtacgtaaagcagctggtatcaccaaagaaaaggtt tctgacatgaactacaaactactgaaaagtgatgaaaatcagtttagactgctgaagactatatggcgaattgttcttgc cttatttgcgacaggaatcttgtacatgctactatatttcagttttggattcaatgcccaagacgccggataccttatca taggaatgtttatatttttcatggtcggtttggtctttttcaaacttattcgatgcgtcatgttactgatggtaccgaat ttattcactggcagaggacgggccttatttctttccattatcactggtttacttttagctggccctgctgttaatatcgc caataacacagatgagctgagtacaagtcttggatgtacagcggacttaatctataaccaaacacaagccttaagaaagc aactggaggaacctctatatgaacttgcccgcaaacttcagagttatatgtacgagctacgactcatcattgacggactt gcgacagctctagaacccctgaccagcactctcagcgatttctccagtgcggtccagtctgcccttgatgaagtatcagc tctttccgaccaatgcgaaagcgacctgacctctgctaaagaaagctgctcttctggaatagattcagcaaaatctgact gtgaagacacactggatgccatcgacataacagatgaggcttgggatgaagtggaaggggccattgattggttcgaggac aatgggcttttcagacgtaaaagatcaatactcgtggatgactctcagtatctcggaacgtggatggaagtgaatggaaa ccagagggctaaatcaagaaacaaaaggggagtgtgtgatgtattatcagtaggggatagtatatgcaacatagggtctg cattaactacgctgtgtgatccgttttcttatctagagaacaaacttatagaggcatcagaggctatggtcacggccctc gactatgtaactgagtttttcacttttgaagtcgaatcagactttggcctgtccgggacagtgaactattccaagaacgc gtcaactgttctgagtgaaatacaaagcgacatattgtccaggattagtggggtgttaagctttattacaacaattagta atgtgttaggcctcaccttgattatcctgtttatcaaatcactgatttacattaaaaaatatcgaacaaaggatcacttt aacaacattttcatcactaaaggctttgttaggtttgacgacgactgtaagaagaggggagaagaatttgtactgcctct gcattcaagcgaagaagtatacacatacgtcatgacaacaactaagattctttcaccggcggaaatgaaaaccctgaaaa ctgacatgaggctcgtattctaccacgtgttgatatctactttcattattggattcgactatattttgtattatgcgtta gatcttgtgacacagtacgctgatgtggcgttgacggttgaaggaataagcaccatagatgttgagatagaaggcgatgg tatattcaccgtcattttacgagcaatggtagacaatttgaacctcaacagcacgttcagtgttgatctgaattttacat gttgcttgccagatccgtcttaccctgacagctcgaacatccccgtcctaattctgctttatattattgctgccctgttt gtaacgatgcaaggatatggaatgaggctgaggaggaaaatagcctcctctttttatcccgaacaggaagtttgtaggat tcactacctccatgagaaaattatccacaaaaggctgacgttcaaagcttggttaaaagatcatattttcagcagaagga aagaaaacgaagttagagagaagaacaacttcagagcctacctagcttacaagtcaccgttcttttcaaagtacatagaa attatactgccgtcaaggaagtcctgtctaagctgtgataagcggatgcggctagccaaacaggggatgcttactcctcc catgcacctggtcccacctctggcttgctggtggtccgtcgatgctctatttgttgctctattaaggttatcagaaatgg caaagtatagagcaatctctgcctttgaagaaagtaggaaaggagaactaggtatagaaatagatgatgatattgatcga gttaaagacatcgggaatggatgggttctcggtcgaaatcttcgtactggaaagacgggacttttccctgagaattgttt agatagagacaccagtgtaacgggatctgtcgtacgtcgcgttagtaagaggaaaccaagtttaccatcaaaaggttcta aagtacgcttactcttcgacaacctaaaggaatcggtggtcaatcatgctcacatttctaggaaaaaatcatccctagtg aacattgatgacgagcagaaagagcaaaatattgatgtacaagactctagaaagacaaaccaaaatattgaacgttctgt ggattatttgaaatatgaatatgacaaaatccaacaacgagtacgtaaagcagctggcatcaccaaagaaaaggttttgg atatgaattacaagcttctaaaaagtgaagaaaaccagtttcgactgctgaagacaatatggcgaattgttctagctttg tttgctactggaatactgtatatgctattgtacttgagctttggcttcaatgccctagacgccgggtaccttgtcatagg aacgttcattttcctcttaattggacttgtcttttccaaacttattcggtgtgtcgttttactgatggtaccaaatctat ttactggccgagggcgggccttgtttttgtctatcattactggcatcctgttagctggtcctgccataaacatcgccaat aacacagacgagcttagtacaagtctgggatgcacagcggatctgatctataatcaaacacaagccctgcgaaaacaact agaagaacctttgtatgagcttgccaggaagcttaagagctatatgtacgagctacgactagtcattgatggaattacta cagctctagagcctctgacaagcgcactcagtgatttctctaatgcagtacagtatgcaattgatgaagtgtccgagctt gctgaacaatgtgaaagtaatcttacctctgcagtagaaacttgtaccagcggtatcgattcagcaaagactgactgtga ggatgcaatagatgacattgatcctacagacgatgcttgggatgccgtagaggtgctgcggactgtgggagatagtatat gtaacatcggttcttccctgacaacgctctgtgatccgttctcctatctcgaaaatgagctaatatcagcatcagaagcc atggtaacggcccttgactcggtgtcaacattcttttcttttgaattagcatcggattttggtctctcagggaccataaa ctatacaaagaacgcgtcaactgttctgagtgaaatacaaagcgacatattgtccaggattagtggggttttaagcttta ttacgacaattagtaatgtgttaggcctcaccttgattatcctgtttgtcaaatcgctgatttacattaagaaatatcga acgaaggatcactttaacaacattttcatcactaaaggctttgttaggtttgacgacgactgtaaggagaggggagaaga atttgtactgcctctgtatacattggaagaagcatcaacttacgtcatgacaacaacgaaacttcttgcaccggcggaga tgaagaccctgaaaactgacatgaggctcgtattctaccacgtgttgatatctactttcattatcggattcgattatatt ttgtattatgcgttagatcttgtgacacagtacgctgatgtggcgttgacggttgaagggataagcaccatagatgttga gatagaaggcgatggtatattcaccgtcattttacgagcaatggtggacaatttgaacctcaacagcacgttcagtgttg atctgaattttacgtgttgcctgccagatccgtcttaccccgacagttcgaacatccctgtcttactactactttatgtt attgccgctttgtttgtaacaatgcagggatatggaatgaggctgaggagaaagatagcctcctctttttatcctgaaca ggaagtttgtaggattcactacctccatgagaaaattatccacaaaaggctgacgttcaaagcttggttaaaagatcata ttttcagcagaaggaaagaaaacgaagttagagagaagatcagcttcagagcctacctagcttacaagtcaccgttcttt tcaaagtacatagaaattatactgccgtcaaggaagtcctgtctaagctgtgataaggtgggtcggagagggatgatttt taagaaatgtgataatacatcctgcaatgcactgttttgtgaggattgttttaaggtcaccaagggctattgtcttgtct gtgatacaaaaaacgaaattgaaaagatggaaacgaaaggatga |
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Protein
| Protein ID | pfu_aug2.0_2055.1_18667.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2055.1_18667.t1 MATYKAIVAHEENKKGELSIEIDDDVDRIKDIGNGWVLGRNVRTGKTGLFPENCLDRNTSVTGSIVRRVSKRKPSLPSKG PKVRLLLDNLKESVSNNVHLPLKKAPAESLKNSREEQYSSSEEVPRKDRNIERSVDYLKYEYEKIQQQVRKAAGITKEKV SDMNYKLLKSDENQFRLLKTIWRIVLALFATGILYMLLYFSFGFNAQDAGYLIIGMFIFFMVGLVFFKLIRCVMLLMVPN LFTGRGRALFLSIITGLLLAGPAVNIANNTDELSTSLGCTADLIYNQTQALRKQLEEPLYELARKLQSYMYELRLIIDGL ATALEPLTSTLSDFSSAVQSALDEVSALSDQCESDLTSAKESCSSGIDSAKSDCEDTLDAIDITDEAWDEVEGAIDWFED NGLFRRKRSILVDDSQYLGTWMEVNGNQRAKSRNKRGVCDVLSVGDSICNIGSALTTLCDPFSYLENKLIEASEAMVTAL DYVTEFFTFEVESDFGLSGTVNYSKNASTVLSEIQSDILSRISGVLSFITTISNVLGLTLIILFIKSLIYIKKYRTKDHF NNIFITKGFVRFDDDCKKRGEEFVLPLHSSEEVYTYVMTTTKILSPAEMKTLKTDMRLVFYHVLISTFIIGFDYILYYAL DLVTQYADVALTVEGISTIDVEIEGDGIFTVILRAMVDNLNLNSTFSVDLNFTCCLPDPSYPDSSNIPVLILLYIIAALF VTMQGYGMRLRRKIASSFYPEQEVCRIHYLHEKIIHKRLTFKAWLKDHIFSRRKENEVREKNNFRAYLAYKSPFFSKYIE IILPSRKSCLSCDKRMRLAKQGMLTPPMHLVPPLACWWSVDALFVALLRLSEMAKYRAISAFEESRKGELGIEIDDDIDR VKDIGNGWVLGRNLRTGKTGLFPENCLDRDTSVTGSVVRRVSKRKPSLPSKGSKVRLLFDNLKESVVNHAHISRKKSSLV NIDDEQKEQNIDVQDSRKTNQNIERSVDYLKYEYDKIQQRVRKAAGITKEKVLDMNYKLLKSEENQFRLLKTIWRIVLAL FATGILYMLLYLSFGFNALDAGYLVIGTFIFLLIGLVFSKLIRCVVLLMVPNLFTGRGRALFLSIITGILLAGPAINIAN NTDELSTSLGCTADLIYNQTQALRKQLEEPLYELARKLKSYMYELRLVIDGITTALEPLTSALSDFSNAVQYAIDEVSEL AEQCESNLTSAVETCTSGIDSAKTDCEDAIDDIDPTDDAWDAVEVLRTVGDSICNIGSSLTTLCDPFSYLENELISASEA MVTALDSVSTFFSFELASDFGLSGTINYTKNASTVLSEIQSDILSRISGVLSFITTISNVLGLTLIILFVKSLIYIKKYR TKDHFNNIFITKGFVRFDDDCKERGEEFVLPLYTLEEASTYVMTTTKLLAPAEMKTLKTDMRLVFYHVLISTFIIGFDYI LYYALDLVTQYADVALTVEGISTIDVEIEGDGIFTVILRAMVDNLNLNSTFSVDLNFTCCLPDPSYPDSSNIPVLLLLYV IAALFVTMQGYGMRLRRKIASSFYPEQEVCRIHYLHEKIIHKRLTFKAWLKDHIFSRRKENEVREKISFRAYLAYKSPFF SKYIEIILPSRKSCLSCDKVGRRGMIFKKCDNTSCNALFCEDCFKVTKGYCLVCDTKNEIEKMETKG |
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