Gene
| Gene Model ID | pfu_aug2.0_2058.1_28641 |
|---|---|
| Locus | scaffold2058.1 : 11446 ... 13110 : + |
| To GenomeBrowser | scaffold2058.1:11446..13110 |
| Genes list of scaffold | scaffold2058.1 |
| Synonym | pfu_aug1.0_4955.1_67104 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2058.1_28641.t1 | 1 | 1 | Fibrinogen_C | 150 | 376 | 0.0 | 165.3 | 0.0 | 0.0 | 164.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2058.1_28641.t1 | gi|585677246|ref|XP_006819107.1| | PREDICTED: fibrinogen-like protein 1-like [Saccoglossus kowalevskii] | 2.00386e-43 |
| pfu_aug2.0_2058.1_28641.t1 | gi|641710624|ref|XP_008144453.1| | PREDICTED: fibrinogen-like protein 1 [Eptesicus fuscus] | 8.00141e-43 |
| pfu_aug2.0_2058.1_28641.t1 | gi|554538942|ref|XP_005864138.1| | PREDICTED: fibrinogen-like protein 1 isoform X1 [Myotis brandtii] | 1.00053e-42 |
| pfu_aug2.0_2058.1_28641.t1 | gi|584066871|ref|XP_006753848.1| | PREDICTED: fibrinogen-like protein 1 isoform X1 [Myotis davidii] | 1.99965e-42 |
| pfu_aug2.0_2058.1_28641.t1 | gi|736205862|ref|XP_010775796.1| | PREDICTED: angiopoietin-related protein 6 [Notothenia coriiceps] | 1.99965e-42 |
Transcript
| Transcript ID | pfu_aug2.0_2058.1_28641.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2058.1_28641.t1 atgatttgctaccgagatttattattttgtcaagttcttattttcgtggtaaataattgctgtggacagcctaccatacg gtttagcgactggatgtcaaccagatacgaacagaggacatttcgcaggctacagaaaagcctagattacattctgttgg aaatgaagcgacaaactcacgagaacaggcaattaaaacgtcagatggttcatcttcagaacaaagtgacgtatcaggac gatctcctattcaacctgacggaatctctggtctgtagacagtacaggtcggaggaggtggacggcgaattgaacaggag gctggaaatagacatcacgatggagaaaccaataaaagcagaggtaacgcttccggaaaaggaaacaacaaacgtacctc aagacaaaccggaagtgacgtcgacgactgaaccaccaaaagcctacttcaaagactgtcatgaaatactgaaaaatggt acgacgctaaacggcacatactcaatcagaccggaagggtccgaacaaccttttgacgtcatatgtgagatgcacgaggg cgtggcatggaatgtgatacagcgacgacaagacgggtccgtggatttttaccgtccgtggtccgactataaacagggat ttggctcgctggacggcgagttctggatcgggaataaacatatgcattatctgacgtcacagacgaggtatatgttaaaa atagacatgtgggactggaagcttacattcaaaacttcggcaaatgcactagattcaaattacttttacgcagagagtag ctattttcgggttggaaacgaatcagaatactttaaacttcatgttcccgaaagcttctttgcctacagtggatacagcg gaagtggactcagagtgcattctggtccatttatgacatatgatgtagcaattccccgcatgcgtgaaaattgtgccgtc aaattccactgtggatggtggttcacaacgtgtgttcgaaatgcaaacctgaacggcaggtattattctggtggatataa gaataaaactactcgaacacgcgccaaggacgacatatactggccgaacattcctcaatcgcttaaaaaagttcagatga gaatcgcaagaatgaaaaaggaataa |
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Protein
| Protein ID | pfu_aug2.0_2058.1_28641.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2058.1_28641.t1 MICYRDLLFCQVLIFVVNNCCGQPTIRFSDWMSTRYEQRTFRRLQKSLDYILLEMKRQTHENRQLKRQMVHLQNKVTYQD DLLFNLTESLVCRQYRSEEVDGELNRRLEIDITMEKPIKAEVTLPEKETTNVPQDKPEVTSTTEPPKAYFKDCHEILKNG TTLNGTYSIRPEGSEQPFDVICEMHEGVAWNVIQRRQDGSVDFYRPWSDYKQGFGSLDGEFWIGNKHMHYLTSQTRYMLK IDMWDWKLTFKTSANALDSNYFYAESSYFRVGNESEYFKLHVPESFFAYSGYSGSGLRVHSGPFMTYDVAIPRMRENCAV KFHCGWWFTTCVRNANLNGRYYSGGYKNKTTRTRAKDDIYWPNIPQSLKKVQMRIARMKKE |
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