Gene
| Gene Model ID | pfu_aug2.0_2058.1_28644 |
|---|---|
| Locus | scaffold2058.1 : 47936 ... 61174 : + |
| To GenomeBrowser | scaffold2058.1:47936..61174 |
| Genes list of scaffold | scaffold2058.1 |
| Synonym | pfu_aug1.0_12403.1_03229 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2058.1_28644.t1 | 2 | 1 | MAM33 | 82 | 141 | 6.2e-22 | 78.3 | 4.0e-08 | 0.0006 | 19.6 |
| pfu_aug2.0_2058.1_28644.t1 | 2 | 2 | MAM33 | 186 | 304 | 6.2e-22 | 78.3 | 4.7e-21 | 6.9e-17 | 61.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2058.1_28644.t1 | gi|524873900|ref|XP_005093692.1| | PREDICTED: complement component 1 Q subcomponent-binding protein, mitochondrial-like [Aplysia californica] | 1.0e-36 |
| pfu_aug2.0_2058.1_28644.t1 | gi|241558809|ref|XP_002400595.1| | glycoprotein gC1qBP, putative [Ixodes scapularis] | 3.0e-29 |
| pfu_aug2.0_2058.1_28644.t1 | gi|260799758|ref|XP_002594851.1| | hypothetical protein BRAFLDRAFT_124439 [Branchiostoma floridae] | 1.0e-27 |
| pfu_aug2.0_2058.1_28644.t1 | gi|554582356|ref|XP_005882655.1| | PREDICTED: complement component 1 Q subcomponent-binding protein, mitochondrial [Myotis brandtii] | 2.0e-27 |
| pfu_aug2.0_2058.1_28644.t1 | gi|558188037|ref|XP_006102798.1| | PREDICTED: complement component 1 Q subcomponent-binding protein, mitochondrial [Myotis lucifugus] | 2.0e-27 |
Transcript
| Transcript ID | pfu_aug2.0_2058.1_28644.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2058.1_28644.t1 atggctggaatggcaagtcgtacttcttttcacatgtataagacattgtctggttttgctcattcatgtagtaagagctc tatacgagctttgagctcaataaatggattgcatcacgtgaattgtagaccaacacttgcagttctgaacactcatttgc catgtttacagaataaaagcacgtgtaaaagatggacaagtacacaagcttcggagccaatagacgcagagttttcacag tttttgtcagaagagatagcaagagaacaagagtcccataaagatcatcaagaagttaaaacagtggaaggatggacacc agaattcaaaggaacagatgtcgttttatcaaagtcacacaaaaatgaaaaaatttcagttaaatttaatattgttgatt ctgtggatgtagcagatgatagtctggaatctgaggaaacaaaggatgtcaaggtannnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncattatgctatc taagccgccttttgttgtggagatccataaggctggtgggaagatcttgacactagaatgtcagttctctgggatggacg aagaactcgatacaccagaagctgatcaacaagaagatgtatatggtgataaattccagatcctagagatagctcttcac gacagtgaaatatccagtacatcatactctgcccaaacatcaacaatggatgctagtatgtatgagatgttaatggacat gctggatgacagaggtattgatgacaagtttatggatcagcttctgaatttctgtactgactacgaacacgcacagtata tcaagttcctcggagatcttaagtcgtttgtagataccaagtga |
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Protein
| Protein ID | pfu_aug2.0_2058.1_28644.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2058.1_28644.t1 MAGMASRTSFHMYKTLSGFAHSCSKSSIRALSSINGLHHVNCRPTLAVLNTHLPCLQNKSTCKRWTSTQASEPIDAEFSQ FLSEEIAREQESHKDHQEVKTVEGWTPEFKGTDVVLSKSHKNEKISVKFNIVDSVDVADDSLESEETKDVKVXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXIMLSKPPFVVEIHKAGGKILTLECQFSGMDEELDTPEADQQEDVYGDKFQILEIALH DSEISSTSYSAQTSTMDASMYEMLMDMLDDRGIDDKFMDQLLNFCTDYEHAQYIKFLGDLKSFVDTK |
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