Gene
| Gene Model ID | pfu_aug2.0_2058.1_28645 |
|---|---|
| Locus | scaffold2058.1 : 62873 ... 70275 : - |
| To GenomeBrowser | scaffold2058.1:62873..70275 |
| Genes list of scaffold | scaffold2058.1 |
| Synonym | pfu_aug1.0_12403.1_03230 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2058.1_28645.t1 | 7 | 1 | Reo_sigmaC | 11 | 35 | 1.5e-06 | 27.6 | 0.24 | 520.0 | -0.5 |
| pfu_aug2.0_2058.1_28645.t1 | 7 | 2 | Reo_sigmaC | 130 | 172 | 1.5e-06 | 27.6 | 0.04 | 84.0 | 2.1 |
| pfu_aug2.0_2058.1_28645.t1 | 7 | 3 | Reo_sigmaC | 245 | 316 | 1.5e-06 | 27.6 | 0.0039 | 8.4 | 5.4 |
| pfu_aug2.0_2058.1_28645.t1 | 7 | 4 | Reo_sigmaC | 393 | 468 | 1.5e-06 | 27.6 | 0.0021 | 4.5 | 6.3 |
| pfu_aug2.0_2058.1_28645.t1 | 7 | 5 | Reo_sigmaC | 526 | 595 | 1.5e-06 | 27.6 | 0.021 | 44.0 | 3.1 |
| pfu_aug2.0_2058.1_28645.t1 | 7 | 6 | Reo_sigmaC | 589 | 698 | 1.5e-06 | 27.6 | 0.00015 | 0.33 | 10.0 |
| pfu_aug2.0_2058.1_28645.t1 | 7 | 7 | Reo_sigmaC | 723 | 756 | 1.5e-06 | 27.6 | 0.27 | 580.0 | -0.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2058.1_28645.t1 | gi|676447232|ref|XP_009051340.1| | hypothetical protein LOTGIDRAFT_72099, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2058.1_28645.t1 | gi|390338766|ref|XP_787671.2| | 0.0 | |
| pfu_aug2.0_2058.1_28645.t1 | gi|524915761|ref|XP_005112671.1| | PREDICTED: coiled-coil domain-containing protein 157-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_2058.1_28645.t1 | gi|641775381|ref|XP_008171117.1| | PREDICTED: coiled-coil domain-containing protein 157 [Chrysemys picta bellii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2058.1_28645.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2058.1_28645.t1 atggctgaattactgggtggtcaagccattatagacagcctgcgtacagatgtacaggacttacagtgggccgtaacaga cctcatctccagggtcgggccagttgagtgcatgtcatggaaattccccgataaaaaatcgtatgaagttgatgtggaag agttgctggacttgtatagttactctgatgatgtagaagataaccaggtggcgcatatagctctgtatgaactagttatt gacagattcctatacttcattcatgccttatcatcccacacaaatcagctgttatcacgagccggcggggagaaaagtca tggaaaaagtacatctataggccttattgtaaaacgatactgtagcaagcaagtacaactgaatacaatagtccaacaga ccatgtcagatagtaaaagtaagactaggaaagtggcagatatggaaagcaacatgaagaaaatgacggaggagtttgaa aaattaacgaacagtgatacagggtctacggcctccttaccgtatcagttaagtccacacaaagtagggtctgccatgag tgggtttataacaccaagtaaaatagaggaaatatcaagagacgcttgtagtaaatgttgtcagacagtcgagactgcct ttgtaccttgtgaaggatgccatgtggtacagaaaaatttccgaaatgccggagacgtgattgtgaaaatgtgtcagagt cagaggttaccatcaacactacaaaaatatcgaccattagtagctgatgtcaaatggctgacgccaaatgatgtcgccag gtggtcgagtgaaatgacaaaagatttaggtcgtattgataagcacatggattacttaatgtcaactattaatccactaa aagaagaaatcgaaatgcatgaactaaataaaaagaggttagaaaagagagtggcaaattttgatgcagacatgagaaaa gaaaaggaagtacagtatgctttacaaagacagtttgatgttaaaatgaaagaattggaggatgaccataaacaaacagt taccatggtaactaaacagaaagaggaattggctcataccaagcagttactggatacaaatttggaaaaatgatgccatg tggtacagaaaaatttccgaaatgccggagacgtgattgtgaaaatgtgtcagagtcagaggttaccatcaacactacaa aaatatcgaccattagtagctgatgtcaaatggctgacgccaaatgatgtcgccaggtggtcgagtgaaatgacaaaaga tttaggtcgtattgataagcacatggattacttaatgtcaactattaatccactaaaagaagaaatcgaaatgcatgaac taaataaaaagaggttagaaaagagagtggcaaattttgatgcagacatgagaaaagaaaaggaagtacagtatgcttta caaagacagtttgacgttaaaatgaaagaattggaggatgaccataaacaaacagttaccatggtaactaaacagaaaga agaattgactcgtaccaagcaattactggatacaaatttggaaaaatgtaaacaagaattggaagtgacccatgaaagat taacagagctggacaaaacaaagcaggtgctagaaagggacttacaggacaatagaactaactgtaaagaagtagagaga ttacagggggagataaccaggttacaggatcatctacaggagatcgagatcaaactacagaggtcaactaaggaactgtc caaggaacaggccaggaataaaagtgcctctaaacacagcaagagtctacagtctaagcaggacaacttgttacataagg tagacaccctggatcaggaaaacgaggaactgaaggaacaggtggctgagatagaggaggagaaagataaaatacaggag acactggatacagtacaagtgaaagtcaaaaaatatcaacaaaagataaaacaaaatgagaatttgatagaacaattgaa aacagagaaagaagatcttgaagtatctgcggtaaaactgaaagaagatgtagaaaaaataggtcatcaactagaggaag ctcaagaaagggaaaggttactaatagaataccctgacctgaacggacctgttaaccaggatttcaaaggtacaggtgac cttgccactgatatggagaaccaggtcaaggccaactccatccgtatccaagtactggaggagcagaatgagaccttacg taactctatatctaaagttctggccatgcaggatgggaggtcacaacccaaggtggcatgggagaaggtaaaacagatat atatgtag |
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Protein
| Protein ID | pfu_aug2.0_2058.1_28645.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2058.1_28645.t1 MAELLGGQAIIDSLRTDVQDLQWAVTDLISRVGPVECMSWKFPDKKSYEVDVEELLDLYSYSDDVEDNQVAHIALYELVI DRFLYFIHALSSHTNQLLSRAGGEKSHGKSTSIGLIVKRYCSKQVQLNTIVQQTMSDSKSKTRKVADMESNMKKMTEEFE KLTNSDTGSTASLPYQLSPHKVGSAMSGFITPSKIEEISRDACSKCCQTVETAFVPCEGCHVVQKNFRNAGDVIVKMCQS QRLPSTLQKYRPLVADVKWLTPNDVARWSSEMTKDLGRIDKHMDYLMSTINPLKEEIEMHELNKKRLEKRVANFDADMRK EKEVQYALQRQFDVKMKELEDDHKQTVTMVTKQKEELAHTKQLLDTNLEKXCHVVQKNFRNAGDVIVKMCQSQRLPSTLQ KYRPLVADVKWLTPNDVARWSSEMTKDLGRIDKHMDYLMSTINPLKEEIEMHELNKKRLEKRVANFDADMRKEKEVQYAL QRQFDVKMKELEDDHKQTVTMVTKQKEELTRTKQLLDTNLEKCKQELEVTHERLTELDKTKQVLERDLQDNRTNCKEVER LQGEITRLQDHLQEIEIKLQRSTKELSKEQARNKSASKHSKSLQSKQDNLLHKVDTLDQENEELKEQVAEIEEEKDKIQE TLDTVQVKVKKYQQKIKQNENLIEQLKTEKEDLEVSAVKLKEDVEKIGHQLEEAQERERLLIEYPDLNGPVNQDFKGTGD LATDMENQVKANSIRIQVLEEQNETLRNSISKVLAMQDGRSQPKVAWEKVKQIYM |
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