Gene
| Gene Model ID | pfu_aug2.0_2058.1_28646 |
|---|---|
| Locus | scaffold2058.1 : 70876 ... 76707 : + |
| To GenomeBrowser | scaffold2058.1:70876..76707 |
| Genes list of scaffold | scaffold2058.1 |
| Synonym | pfu_aug1.0_5691.1_59853 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2058.1_28646.t1 | 1 | 1 | ABC2_membrane_3 | 1 | 175 | 1.1e-07 | 31.1 | 8.8e-11 | 1.5e-07 | 30.8 |
| pfu_aug2.0_2058.1_28646.t1 | 1 | 1 | ABC_tran | 277 | 346 | 8.1e-13 | 48.8 | 7.1e-16 | 1.2e-12 | 48.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2058.1_28646.t1 | gi|700319400|ref|XP_009912364.1| | PREDICTED: ATP-binding cassette sub-family A member 2-like, partial [Haliaeetus albicilla] | 0.0 |
| pfu_aug2.0_2058.1_28646.t1 | gi|560938402|ref|XP_006194994.1| | PREDICTED: ATP-binding cassette sub-family A member 2-like, partial [Camelus ferus] | 0.0 |
| pfu_aug2.0_2058.1_28646.t1 | gi|260810772|ref|XP_002600122.1| | hypothetical protein BRAFLDRAFT_66631 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_2058.1_28646.t1 | gi|742080053|ref|XP_010848752.1| | PREDICTED: ATP-binding cassette sub-family A member 2-like, partial [Bison bison bison] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2058.1_28646.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2058.1_28646.t1 atgagaatgatgggattgagtaatgcagtccattggtgtgcgtggtttacagtagtgtttgtacagatgacggtaaccat gtgtgttctaacagtcatgctgaaggtcggtggagtattgacctatagtaatccatacattgtgttcatcgtactggaga tattcgctatcgttactatttgcttctcgttcttggtgagcacatgttattccaaggccaaagtagcggcagcctgtgct ggcatcgtatatttcctgacatacgtgccgtatatgtatgtagctatcagggaggatgtagccggagaccaaatctctgc cgtcgtcaaatcagccgtgtcgttgttttccaccactgcgttcggtttgagtgggaagtattttgcgttctatgagaagg agggtgtgggtgtacagtggtacaacatacacttatcaccggtagagaatgaccagtttaaccttttgacctgtataatg atgatggttatggacaccttcctgtactgcatactgtcatggtacattgaaaacgtcttcccaggatcttatggtctacc aaagccttggtacttcctgttcacaaggcagtactggtgtggtggtacatacaagtcctcagagatagactgtactcacg ttctggacatgtgccgtcggcatggacatacttaccagctgatcggagatgaagaacaggcgtgcggcatggaaccaaga gatgctgaatttgctcggaggtttgagtcggaacccacccatatcccacttggtgtgagcatcgttaatctgaccaagat ctataagacaggaaagaaattggcagtaaacaaacttagcttaaacctgtttgaagatcagataacgtcattcctgggtc acaatggggccggcaaaactactactatgtccatactgacagggttatttccccctacatctggccatgcagtaatatac gacaatgacatcagaacagaaatggacgagatacgacagagtttgggaatgtgtccacaacataatgtattatttgataa gtaa |
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Protein
| Protein ID | pfu_aug2.0_2058.1_28646.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2058.1_28646.t1 MRMMGLSNAVHWCAWFTVVFVQMTVTMCVLTVMLKVGGVLTYSNPYIVFIVLEIFAIVTICFSFLVSTCYSKAKVAAACA GIVYFLTYVPYMYVAIREDVAGDQISAVVKSAVSLFSTTAFGLSGKYFAFYEKEGVGVQWYNIHLSPVENDQFNLLTCIM MMVMDTFLYCILSWYIENVFPGSYGLPKPWYFLFTRQYWCGGTYKSSEIDCTHVLDMCRRHGHTYQLIGDEEQACGMEPR DAEFARRFESEPTHIPLGVSIVNLTKIYKTGKKLAVNKLSLNLFEDQITSFLGHNGAGKTTTMSILTGLFPPTSGHAVIY DNDIRTEMDEIRQSLGMCPQHNVLFDK |
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