Gene
| Gene Model ID | pfu_aug2.0_206.1_20423 |
|---|---|
| Locus | scaffold206.1 : 112066 ... 127397 : + |
| To GenomeBrowser | scaffold206.1:112066..127397 |
| Genes list of scaffold | scaffold206.1 |
| Synonym | pfu_aug1.0_8499.1_38769 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| an1-type zinc finger protein 2a | GO:0008270 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_206.1_20423.t1 | 2 | 1 | zf-AN1 | 10 | 51 | 7.6e-11 | 41.6 | 3.1e-14 | 7.6e-11 | 41.6 |
| pfu_aug2.0_206.1_20423.t1 | 2 | 2 | zf-AN1 | 57 | 62 | 7.6e-11 | 41.6 | 1.3 | 3300.0 | -2.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_206.1_20423.t1 | gi|676440544|ref|XP_009049211.1| | hypothetical protein LOTGIDRAFT_113088 [Lottia gigantea] | 2.00386e-43 |
| pfu_aug2.0_206.1_20423.t1 | gi|524907562|ref|XP_005108897.1| | PREDICTED: AN1-type zinc finger protein 2B-like [Aplysia californica] | 7.0e-39 |
| pfu_aug2.0_206.1_20423.t1 | gi|556996263|ref|XP_006001775.1| | PREDICTED: AN1-type zinc finger protein 2B-like isoform X3 [Latimeria chalumnae] | 1.0e-35 |
| pfu_aug2.0_206.1_20423.t1 | gi|591381768|ref|XP_007065419.1| | PREDICTED: AN1-type zinc finger protein 2A [Chelonia mydas] | 3.0e-34 |
| pfu_aug2.0_206.1_20423.t1 | gi|597739898|ref|XP_007232127.1| | PREDICTED: AN1-type zinc finger protein 2B-like isoform X1 [Astyanax mexicanus] | 4.0e-34 |
Transcript
| Transcript ID | pfu_aug2.0_206.1_20423.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_206.1_20423.t1 atggagtttcctgatcttggtcaacactgctttgagaagaattgtaaacaattagactttttgcctatgaaatgtgatgc ttgctcaaacatattttgtcgtgaccatatccactacaacacacatagctgtccagagtcatacaaaaaggacaatcagg tgccagtctgcccattatgtaataagccagtacccttgaagaaagaagaactaccggatgtggtgaaaggatttgagggt acaggcagatatgtgaacagatcaggggcagctgcaattttccggttcaatcagggatctcaacaaccagcatcaaagcc taaaacaacagtgcctaaagctcaacccagacctcaaaacacgccattatcacagattggtagagatctggacagggttt ctgaatgtgaaattgtcatttttgacccccgtaagatttttgctactgaggatgaagccctggcacaagctatacaaatg tccatggccgagtctcaacaacagtctactccagctcctagtaaacaattaacccaacaagagcaggatgacttattact agcccaagcaatagctgctagtcaagaagaggccagaagagaagaaagacgaaggcaagaagctcagcaaagacaacaga ataaaacatcatgtgaggtatcctag |
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Protein
| Protein ID | pfu_aug2.0_206.1_20423.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_206.1_20423.t1 MEFPDLGQHCFEKNCKQLDFLPMKCDACSNIFCRDHIHYNTHSCPESYKKDNQVPVCPLCNKPVPLKKEELPDVVKGFEG TGRYVNRSGAAAIFRFNQGSQQPASKPKTTVPKAQPRPQNTPLSQIGRDLDRVSECEIVIFDPRKIFATEDEALAQAIQM SMAESQQQSTPAPSKQLTQQEQDDLLLAQAIAASQEEARREERRRQEAQQRQQNKTSCEVS |
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