Gene
| Gene Model ID | pfu_aug2.0_206.1_20424 |
|---|---|
| Locus | scaffold206.1 : 136000 ... 139045 : - |
| To GenomeBrowser | scaffold206.1:136000..139045 |
| Genes list of scaffold | scaffold206.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ccr4-not transcription complex subunit 7 isoform x5 | GO:0000289 GO:0003676 GO:0004535 GO:0005515 GO:0005634 GO:0005829 GO:0006357 GO:0007095 GO:0007517 GO:0017148 GO:0030014 GO:0048666 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_206.1_20424.t1 | 1 | 1 | CAF1 | 13 | 157 | 1.09301e-43 | 149.4 | 0.0 | 1.30321e-43 | 149.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_206.1_20424.t1 | gi|345482779|ref|XP_003424661.1| | PREDICTED: CCR4-NOT transcription complex subunit 7 isoform X5 [Nasonia vitripennis] | 0.0 |
| pfu_aug2.0_206.1_20424.t1 | gi|156553218|ref|XP_001601395.1| | PREDICTED: CCR4-NOT transcription complex subunit 7 isoform X3 [Nasonia vitripennis] | 0.0 |
| pfu_aug2.0_206.1_20424.t1 | gi|644995234|ref|XP_008206873.1| | PREDICTED: CCR4-NOT transcription complex subunit 7 isoform X4 [Nasonia vitripennis] | 0.0 |
| pfu_aug2.0_206.1_20424.t1 | gi|345482783|ref|XP_003424663.1| | PREDICTED: CCR4-NOT transcription complex subunit 7 isoform X1 [Nasonia vitripennis] | 0.0 |
| pfu_aug2.0_206.1_20424.t1 | gi|170062206|ref|XP_001866568.1| | CCR4-NOT transcription complex subunit 7 [Culex quinquefasciatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_206.1_20424.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_206.1_20424.t1 atgccgtctatagctcagacagaatacggcattaaggatgtatggcatgggaatctagaagacgagtttaaaaagatacg acatgttatccagcagtataagttcgtggcaatggacacagagtttcctggtgtagttgcaaggccaattggggagttta gaagcacggcagactatcagtatcagctgttaaggtgtaatgttgacttactgaaaatcatccaggtgggactaacgttc atggatgagaacggacagacaccctcccccatctccacatggcagtttaacttcaaatataatctaacggaggacatgta tgcacaggagtctatagatctgttacagaactctggaattcagttcaagaagcatgaagaggagggaatagacgttattg actttgccgaacttttgatgacatcaggcgttgtgctaaatgaaaacgtcaagtggctttccttccataggtgcttattt catactctgtgtatatag |
|
Protein
| Protein ID | pfu_aug2.0_206.1_20424.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_206.1_20424.t1 MPSIAQTEYGIKDVWHGNLEDEFKKIRHVIQQYKFVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDLLKIIQVGLTF MDENGQTPSPISTWQFNFKYNLTEDMYAQESIDLLQNSGIQFKKHEEEGIDVIDFAELLMTSGVVLNENVKWLSFHRCLF HTLCI |
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