Gene
| Gene Model ID | pfu_aug2.0_206.1_20430 |
|---|---|
| Locus | scaffold206.1 : 359756 ... 371004 : - |
| To GenomeBrowser | scaffold206.1:359756..371004 |
| Genes list of scaffold | scaffold206.1 |
| Synonym | pfu_aug1.0_7648.1_53008 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calmodulin-like protein 6 | GO:0005819 GO:0008016 GO:0019899 GO:0031982 GO:0035306 GO:0043227 GO:0043234 GO:0044763 GO:0051345 GO:0051592 GO:0051924 GO:0065008 GO:0071704 GO:0080090 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_206.1_20430.t1 | 1 | 1 | EF-hand_6 | 14 | 43 | 4.2e-06 | 26.2 | 3.4e-09 | 1.0e-05 | 24.9 |
| pfu_aug2.0_206.1_20430.t1 | 1 | 1 | EF-hand_7 | 15 | 69 | 2.3e-06 | 27.6 | 1.5e-09 | 4.5e-06 | 26.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_206.1_20430.t1 | gi|704178167|ref|XP_010134360.1| | PREDICTED: calmodulin-like protein 6 [Buceros rhinoceros silvestris] | 3.0e-17 |
| pfu_aug2.0_206.1_20430.t1 | gi|733877404|ref|XP_010705120.1| | PREDICTED: calmodulin, partial [Meleagris gallopavo] | 8.0e-17 |
| pfu_aug2.0_206.1_20430.t1 | gi|505799744|ref|XP_004607860.1| | PREDICTED: calmodulin [Sorex araneus] | 1.0e-16 |
| pfu_aug2.0_206.1_20430.t1 | gi|591351987|ref|XP_007070442.1| | PREDICTED: calmodulin-like [Chelonia mydas] | 1.0e-16 |
| pfu_aug2.0_206.1_20430.t1 | gi|426234329|ref|XP_004011148.1| | 1.0e-16 |
Transcript
| Transcript ID | pfu_aug2.0_206.1_20430.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_206.1_20430.t1 atgatacaggctgaacggttcacagaggagcaaatcgcagaatataaagaaaaattcacagagtttgataagaatggaga cgggacgattcccatgaaggatttggcgactgtaatccgtaagctcgggatgaaccccacagaggcggatctaaaacaat acgccaacgacttcgatgctgaagaatcgaatctaagtatttcctttcatgatagagcagggattgaacaaactcgactt tatgagagtataaaagaatatcatgaagaagtcgaaaaatcagaaaccgaaggcatacaaaatcaggataaaacaggaac caaagcaaacaaacaaaaacctccaccatatgacaagaggcgaattcccgaaatgggagtgagaccaggtgcccaggaag aaaaatggataggcgtggcttatcgctatagggcctatattggagaatag |
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Protein
| Protein ID | pfu_aug2.0_206.1_20430.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_206.1_20430.t1 MIQAERFTEEQIAEYKEKFTEFDKNGDGTIPMKDLATVIRKLGMNPTEADLKQYANDFDAEESNLSISFHDRAGIEQTRL YESIKEYHEEVEKSETEGIQNQDKTGTKANKQKPPPYDKRRIPEMGVRPGAQEEKWIGVAYRYRAYIGE |
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