Gene
| Gene Model ID | pfu_aug2.0_2061.1_05392 |
|---|---|
| Locus | scaffold2061.1 : 1 ... 10925 : - |
| To GenomeBrowser | scaffold2061.1:1..10925 |
| Genes list of scaffold | scaffold2061.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| isobutyryl- mitochondrial | GO:0003995 GO:0005739 GO:0050660 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2061.1_05392.t1 | 1 | 1 | Acyl-CoA_dh_N | 10 | 120 | 1.2e-25 | 90.3 | 3.6e-29 | 1.8e-25 | 89.7 |
| pfu_aug2.0_2061.1_05392.t1 | 1 | 1 | Acyl-CoA_dh_M | 124 | 175 | 1.6e-21 | 75.5 | 5.9e-25 | 2.9e-21 | 74.7 |
| pfu_aug2.0_2061.1_05392.t1 | 1 | 1 | Acyl-CoA_dh_1 | 230 | 279 | 3.7e-09 | 36.8 | 1.3e-12 | 6.3e-09 | 36.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2061.1_05392.t1 | gi|676474879|ref|XP_009060287.1| | hypothetical protein LOTGIDRAFT_229142 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2061.1_05392.t1 | gi|505841363|ref|XP_004614194.1| | PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial [Sorex araneus] | 0.0 |
| pfu_aug2.0_2061.1_05392.t1 | gi|507563676|ref|XP_004665517.1| | PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial [Jaculus jaculus] | 0.0 |
| pfu_aug2.0_2061.1_05392.t1 | gi|658880583|ref|XP_008423233.1| | PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial isoform X2 [Poecilia reticulata] | 0.0 |
| pfu_aug2.0_2061.1_05392.t1 | gi|426371145|ref|XP_004052514.1| | PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial [Gorilla gorilla gorilla] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2061.1_05392.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2061.1_05392.t1 atgattttcacatcacttggactgaaagaagatcagaagcagatccaagccatggcaactgattttgcgaaaaatgaact atttccaaatatggccaagtgggatgaggaggagattttccctgtagatgtattcaaaaaggccgggcagttaggatttg gtgcagtatactgcggagaagagtttggaggaactggtctaggtcgtacagaagcttcagtgattttcgagggtttatct cagggatgtgtcagcactactgcctatatcagtatacacaacatgtgtgcttggatggttgatgagtttggatcagttca gcagagggaaaagtggataccgcaattagcgagcatggagaaactagcttcatactgtctgacagaggctgatcatggga gtgatgcggcaaatctcagaacaacagcaaagctagagggagaccattacatacttaatggatctaagtctttcatcagt ggaggaggcgagacagatttatatgtagtaatgtgtaggacaggggaacctggcccaaaaggtatatcgtgtgtgctggt agaaaaaggctcgccaggtttgtcatttggaaagaaagagaaaaagattggctggaactcccaaccaacacgtgtagtca tttttgaagactgcaaaattcctgcatcaaatatcataggacaacctggggatggtttcaaaatagccatgagaggttta aatgggggtcgtatcaatattgcttcatgttctttgggggcagcacataatagtattgagctcattagggatcatctcaa agtcagaaaacaatttggaaagacactagaacatttccag |
|
Protein
| Protein ID | pfu_aug2.0_2061.1_05392.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2061.1_05392.t1 MIFTSLGLKEDQKQIQAMATDFAKNELFPNMAKWDEEEIFPVDVFKKAGQLGFGAVYCGEEFGGTGLGRTEASVIFEGLS QGCVSTTAYISIHNMCAWMVDEFGSVQQREKWIPQLASMEKLASYCLTEADHGSDAANLRTTAKLEGDHYILNGSKSFIS GGGETDLYVVMCRTGEPGPKGISCVLVEKGSPGLSFGKKEKKIGWNSQPTRVVIFEDCKIPASNIIGQPGDGFKIAMRGL NGGRINIASCSLGAAHNSIELIRDHLKVRKQFGKTLEHFQ |
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