Gene
| Gene Model ID | pfu_aug2.0_2064.1_15378 |
|---|---|
| Locus | scaffold2064.1 : 48621 ... 51765 : - |
| To GenomeBrowser | scaffold2064.1:48621..51765 |
| Genes list of scaffold | scaffold2064.1 |
| Synonym | pfu_aug1.0_18110.1_54462 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2064.1_15378.t1 | 3 | 1 | zf-B_box | 14 | 58 | 2.2e-12 | 46.6 | 3.6e-08 | 4.2e-05 | 23.3 |
| pfu_aug2.0_2064.1_15378.t1 | 3 | 2 | zf-B_box | 74 | 112 | 2.2e-12 | 46.6 | 2.5e-12 | 2.8e-09 | 36.6 |
| pfu_aug2.0_2064.1_15378.t1 | 5 | 1 | NHL | 402 | 418 | 1.2e-09 | 37.6 | 0.014 | 16.0 | 5.6 |
| pfu_aug2.0_2064.1_15378.t1 | 5 | 2 | NHL | 458 | 468 | 1.2e-09 | 37.6 | 9.3 | 11000.0 | -3.3 |
| pfu_aug2.0_2064.1_15378.t1 | 3 | 3 | zf-B_box | 463 | 470 | 2.2e-12 | 46.6 | 6.4 | 7300.0 | -3.1 |
| pfu_aug2.0_2064.1_15378.t1 | 5 | 3 | NHL | 473 | 481 | 1.2e-09 | 37.6 | 4.9 | 5500.0 | -2.4 |
| pfu_aug2.0_2064.1_15378.t1 | 5 | 4 | NHL | 497 | 519 | 1.2e-09 | 37.6 | 1.6e-07 | 0.00018 | 21.2 |
| pfu_aug2.0_2064.1_15378.t1 | 5 | 5 | NHL | 540 | 559 | 1.2e-09 | 37.6 | 1.5e-06 | 0.0017 | 18.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2064.1_15378.t1 | gi|641712472|ref|XP_008145447.1| | PREDICTED: tripartite motif-containing protein 45 isoform X2 [Eptesicus fuscus] | 7.0e-12 |
| pfu_aug2.0_2064.1_15378.t1 | gi|554530429|ref|XP_005860008.1| | PREDICTED: tripartite motif-containing protein 45 isoform X3 [Myotis brandtii] | 2.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_2064.1_15378.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2064.1_15378.t1 atgagtgaccaaggcgccacagtgttccccgttcagacaatggtggaatgtggaatctgtggagggacctttaacgttga ttggttctgtaagacctgtggtggatccctttgtgacacatgctatcaggctcaccagagagcgtccctcttcaaaaatc atatagtggtaccacgaactgtggaagtcctaaggctacatggtccagcgaagattgccgaaatttgccgaatacatccg acaaaagaaatctctacctactgcaacgagtgcaagattccatgctgcgttttatgcttgactgaaaaacaccaacgcca cgccatttctccgatagaggacaagtatctatctgcagaaaaaggtctggaccagtatactagggagttgcaaacagatg ttaagcctagcctggatgccttaaaagacagtttgaaacatcgtctaaaaaaacacgatgagcagattgaaaaagaaagg gacgcgataaacacattaagacgtactctcaaacagaaagtagatgaatcatgtgatctgctcttgaaagaactcgatca agccaaacaggattttagaaactttgaaaaagaaatcgactccagtaaacaaagactagatcagttgataaaagatctcg agattatgataggggagggaaaattagatatcatagaatatttaccacccacccgcaaatctctcatcccggcgtctcct ttgtcagtactgaaagtagcaaaatttgtacctggcagcgatcttattggtttgatacaaaacaagatagggagaataga atttcatgatcaaatctcagacaatgaggagacgaatgcatcctcaaatactgcactagatatagatatcagtgaacaga aatccttgattcaggtcaaaggtattgacaaagctgatatcaaagtaacaaaggtcaaatcgtttaaaagtaagattggg gttagatctcttacctctgctggtaataactcagcatgggttatggattattatagtaataccatgtatctgtattatag taatggtcatgtggtcaggtcattagaagtaaaaaacagtcaaggcatcaatgatatggtcatcacaaggtcaggggata tgatagtgccttgttatgataaaaaagtaagacgtgtgtcagtaggtggtgaggtgtctacactgataaacactggggat attatgcctcaaggtgtatgtctgactgataaggaggagattgtggtgtgtatgtgtatgatgtttgggggtcacctggc tgtgttctctcctgatggacgtagtaagctacgtgagataaggggagtggacagtcagggtaaaccacagatcacactgc cttaccgtgtggtttgtaatggtaaggatctgtgtgtggtgtgtcgtagtaaagtagtgtgtgtggatgagagtgataac gtgaagtgggtgtatgatggtaagcaggctaatctgagggggtcattttatccacatggtatatgtgtagacaagtacca caacctgctggtcactgattacaacaatgactgtgtccattatatagacagggagggagggcttatacaggtcataatga cacacaaacagacagggttacaggatccgtgggggatctgtgtagatgatgagacaggtcaggtgtgggttgggaatcat agtggtgatgttgttatagcaaaatatttaaagtaa |
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Protein
| Protein ID | pfu_aug2.0_2064.1_15378.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2064.1_15378.t1 MSDQGATVFPVQTMVECGICGGTFNVDWFCKTCGGSLCDTCYQAHQRASLFKNHIVVPRTVEVLRLHGPAKIAEICRIHP TKEISTYCNECKIPCCVLCLTEKHQRHAISPIEDKYLSAEKGLDQYTRELQTDVKPSLDALKDSLKHRLKKHDEQIEKER DAINTLRRTLKQKVDESCDLLLKELDQAKQDFRNFEKEIDSSKQRLDQLIKDLEIMIGEGKLDIIEYLPPTRKSLIPASP LSVLKVAKFVPGSDLIGLIQNKIGRIEFHDQISDNEETNASSNTALDIDISEQKSLIQVKGIDKADIKVTKVKSFKSKIG VRSLTSAGNNSAWVMDYYSNTMYLYYSNGHVVRSLEVKNSQGINDMVITRSGDMIVPCYDKKVRRVSVGGEVSTLINTGD IMPQGVCLTDKEEIVVCMCMMFGGHLAVFSPDGRSKLREIRGVDSQGKPQITLPYRVVCNGKDLCVVCRSKVVCVDESDN VKWVYDGKQANLRGSFYPHGICVDKYHNLLVTDYNNDCVHYIDREGGLIQVIMTHKQTGLQDPWGICVDDETGQVWVGNH SGDVVIAKYLK |
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