Gene
| Gene Model ID | pfu_aug2.0_2064.1_15379 |
|---|---|
| Locus | scaffold2064.1 : 58506 ... 76155 : + |
| To GenomeBrowser | scaffold2064.1:58506..76155 |
| Genes list of scaffold | scaffold2064.1 |
| Synonym | pfu_aug1.0_24410.1_40490 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2064.1_15379.t1 | 1 | 1 | P4Ha_N | 3 | 102 | 4.1e-11 | 42.8 | 4.9e-15 | 7.3e-11 | 42.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2064.1_15379.t1 | gi|676427716|ref|XP_009045038.1| | hypothetical protein LOTGIDRAFT_237427 [Lottia gigantea] | 1.0e-23 |
| pfu_aug2.0_2064.1_15379.t1 | gi|645011846|ref|XP_008204499.1| | PREDICTED: prolyl 4-hydroxylase subunit alpha-1-like isoform X1 [Nasonia vitripennis] | 5.0e-12 |
| pfu_aug2.0_2064.1_15379.t1 | gi|645011860|ref|XP_008204506.1| | PREDICTED: prolyl 4-hydroxylase subunit alpha-1-like isoform X2 [Nasonia vitripennis] | 3.0e-11 |
| pfu_aug2.0_2064.1_15379.t1 | gi|645011862|ref|XP_008204508.1| | PREDICTED: prolyl 4-hydroxylase subunit alpha-1-like isoform X3 [Nasonia vitripennis] | 1.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_2064.1_15379.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2064.1_15379.t1 atgactagcacgattgacgatgcaaaggatttacatagagagatcgggctctcctacagggattacattaaacatccgat taacacgttcctactcgccaaacgattggccacaaaatggcgggaaatcattaacaggttattggagagttcttcttgtg taaaagatcttcgagtcaagttgcagaatatggaagacgctataccagaaaaagtggatttcaagaaaatcgcctacagc ctaaccaacttaaatttgtatggaggattttcattggatgaaattataaaagggaatttaaacggatatgctccgaaaca agcattttcattggaggatatttcagacattggacatgcgtcctatgaccgggaggattactactacgcctataagatat tgagttacgtgtacgataggatgaaatcaaatcgtatcaatgaattagaaaatgggataacgataggaaatcaagctagt cgtctgtcatctgcttgttacaagggtgcgttcctttatacggttatatccgtttgttttggtaatggaacacgccgttc cagtggatcggatcggatcggatcggatctgacgcgttttggaccgacgttcgagcctgttccaatatggcggacatggt tacgatctctgaatagtgctagaaatgttattgtacttggaaatttcgattctaaaaacaagatcgctaaacggaatctc gagtattacatagcagtgacgaaaaagtccaagacgggtgaaccaaaaaggaaacggtcaacacgaaaaagtcagagata cttcgaagaaatgtgtcgctctcaaataaaagagatgctgtcaaaatcaacaaggttagaatgtctatatttcccacacc ggaaacaagatgttccctaccaaaagtcacgtgtcaaagcggaagttctgcacaggacgccattgatcatcaaattctat gacgtagcggacaatgacactgccaaagctgtggcctttatggcgtacaaacagatgtcagagagcaacattattggata taagtcttctatacagagtgtggcagtaaaagatcgtacatattggaagtgggtgccgaaactacaaactaagatacttg gtctcaaaatgagcaaatttcccccaaaattgacttcattcatggtaaacgaagttggaatagatgggtatgccgcacgg aataacagtaaaacgaaatacccaccagttggaatgtatgtgacgttttacataagtcaacttaactgtttcatcacttt tctacactttctagggagatatgctgttttatga |
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Protein
| Protein ID | pfu_aug2.0_2064.1_15379.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2064.1_15379.t1 MTSTIDDAKDLHREIGLSYRDYIKHPINTFLLAKRLATKWREIINRLLESSSCVKDLRVKLQNMEDAIPEKVDFKKIAYS LTNLNLYGGFSLDEIIKGNLNGYAPKQAFSLEDISDIGHASYDREDYYYAYKILSYVYDRMKSNRINELENGITIGNQAS RLSSACYKGAFLYTVISVCFGNGTRRSSGSDRIGSDLTRFGPTFEPVPIWRTWLRSLNSARNVIVLGNFDSKNKIAKRNL EYYIAVTKKSKTGEPKRKRSTRKSQRYFEEMCRSQIKEMLSKSTRLECLYFPHRKQDVPYQKSRVKAEVLHRTPLIIKFY DVADNDTAKAVAFMAYKQMSESNIIGYKSSIQSVAVKDRTYWKWVPKLQTKILGLKMSKFPPKLTSFMVNEVGIDGYAAR NNSKTKYPPVGMYVTFYISQLNCFITFLHFLGRYAVL |
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