Gene
| Gene Model ID | pfu_aug2.0_2064.1_15380 |
|---|---|
| Locus | scaffold2064.1 : 81396 ... 86321 : + |
| To GenomeBrowser | scaffold2064.1:81396..86321 |
| Genes list of scaffold | scaffold2064.1 |
| Synonym | pfu_aug1.0_21742.1_11406 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2064.1_15380.t1 | 2 | 1 | zf-B_box | 10 | 50 | 1.5e-12 | 47.1 | 7.2e-09 | 2.1e-05 | 24.2 |
| pfu_aug2.0_2064.1_15380.t1 | 2 | 2 | zf-B_box | 62 | 100 | 1.5e-12 | 47.1 | 2.9e-10 | 8.7e-07 | 28.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2064.1_15380.t1 | gi|260812615|ref|XP_002601016.1| | hypothetical protein BRAFLDRAFT_128153 [Branchiostoma floridae] | 2.0e-08 |
| pfu_aug2.0_2064.1_15380.t1 | gi|686646886|ref|XP_009315888.1| | putative zinc finger protein [Trypanosoma grayi] | 7.0e-08 |
Transcript
| Transcript ID | pfu_aug2.0_2064.1_15380.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2064.1_15380.t1 atggccgcgttataccagtggcaactaccttgcctgatatgtggggatgcagtgaagtttcattgtaacacctgtgggga catactgtgcgccaagtgcagaaacaatcacttgaaaagtggtgccagtaaaaaccacaaagtagtaccttatgctgaac gagtagaacctagagcttccagcgattgcagtgctcatccgggaaatcagtatcacgcatggtgccagagatgccttaag gaagtctgtaatgaatgcatcttttctgtagagcataggggacatacttttcagaagcttggagaaattgttggtgagag aaggaaggaactgcaaggagaattgagcaaaaacgaaataattattaaaaagtggacagaatttcttgaagttgtcaaag tcaaggagaagcaacaccaagatcaagttagacaactggagattttcatgtcgaaaaggacgtccgaacttttaagctgt atcaagcagatagaggaaatgaatagaaccaccctgcgatcaatttctaaacagggacaacagtctctgatagatcataa gcgtaaagctgaagatgcattgaaaatattaggaaagagggcagcaattcttgatgataaattaagatcgagtgatacaa agaatttaatggcgcgttatgattcttacatatcaccaaacttaacaaatattcccgtagtaaatcttcccgattgcaag ttcacgtctggcagattagatcaggaagctttagttgagatgtatgggcaagttggcacaagagttgaacagtccaaaac taaagtacaagttacaaagacaccaattaagtcaaagactggagcaaatacacaagcaacaatgaaaagcttagatctgg cgaaccttgcctcagtgatttctgctcctgactttagaggcagacctcctagcaagaccgttgcattctacagcagacca aagcgcagcgcgagcaaatga |
|
Protein
| Protein ID | pfu_aug2.0_2064.1_15380.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2064.1_15380.t1 MAALYQWQLPCLICGDAVKFHCNTCGDILCAKCRNNHLKSGASKNHKVVPYAERVEPRASSDCSAHPGNQYHAWCQRCLK EVCNECIFSVEHRGHTFQKLGEIVGERRKELQGELSKNEIIIKKWTEFLEVVKVKEKQHQDQVRQLEIFMSKRTSELLSC IKQIEEMNRTTLRSISKQGQQSLIDHKRKAEDALKILGKRAAILDDKLRSSDTKNLMARYDSYISPNLTNIPVVNLPDCK FTSGRLDQEALVEMYGQVGTRVEQSKTKVQVTKTPIKSKTGANTQATMKSLDLANLASVISAPDFRGRPPSKTVAFYSRP KRSASK |
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