Gene
| Gene Model ID | pfu_aug2.0_2074.1_15384 |
|---|---|
| Locus | scaffold2074.1 : 41915 ... 65585 : - |
| To GenomeBrowser | scaffold2074.1:41915..65585 |
| Genes list of scaffold | scaffold2074.1 |
| Synonym | pfu_aug1.0_113383.1_13704 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| gamma-tubulin complex component 5 | GO:0043229 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2074.1_15384.t1 | 1 | 1 | Spc97_Spc98 | 166 | 468 | 2.2e-37 | 128.6 | 6.79994e-41 | 2.5e-37 | 128.4 |
| pfu_aug2.0_2074.1_15384.t1 | 1 | 1 | Neur_chan_LBD | 476 | 635 | 6.2e-27 | 94.1 | 3.5e-30 | 1.3e-26 | 93.1 |
| pfu_aug2.0_2074.1_15384.t1 | 1 | 1 | Neur_chan_memb | 685 | 789 | 8.7e-13 | 48.7 | 4.0e-16 | 1.5e-12 | 47.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2074.1_15384.t1 | gi|676484105|ref|XP_009063239.1| | hypothetical protein LOTGIDRAFT_235580 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2074.1_15384.t1 | gi|532062285|ref|XP_005317020.1| | PREDICTED: gamma-tubulin complex component 5 [Ictidomys tridecemlineatus] | 0.0 |
| pfu_aug2.0_2074.1_15384.t1 | gi|527266888|ref|XP_005151595.1| | PREDICTED: gamma-tubulin complex component 5 [Melopsittacus undulatus] | 0.0 |
| pfu_aug2.0_2074.1_15384.t1 | gi|514753197|ref|XP_005021304.1| | PREDICTED: gamma-tubulin complex component 5-like [Anas platyrhynchos] | 0.0 |
| pfu_aug2.0_2074.1_15384.t1 | gi|564245969|ref|XP_006262101.1| | PREDICTED: gamma-tubulin complex component 5-like [Alligator mississippiensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2074.1_15384.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2074.1_15384.t1 atgtcgagtcttggaagttggagcgtcgaaaatgcaagtctagcggagacagaggaaaattttggattatgtttgcagtt tgcttcgtccaatcttagatttcatagatttttagatgtggacagtcacaaagtctcaaaatctttacaaggtgacccca gcctctccgccatcatgtctgatgcctccactctgtatgtagtggatgatgcccctactcaggaagaggatagcgtggta tggctgaaacgcaacgttaccgtacagtattggcacggcatggagagagataatagtaacgatgtggaaaatctggccaa taattgggagagatacaaggaacaatgtaatcccctatacagcagacagagcagaatagaaatgacagaaatacaactta tgagagaagttctatgggagagatacaaggaacaatgtaatcccttatacagcagacagagcagaatagaaatgacagaa atacaacttatgagagaagttctatggatgttgtcgggtgtcaaagattcctttgtatttgtctacgatggtcagaaaca cagagtaagggataatattggagtcagtcaccttacagataattccttgtacagctcgttagctgattttgccaagtacg gtacatttctacacaagttacaatccttcactgagaacgttgtcgatttatcctgctcggcagcgtctgggcgaggggat ttggtgtcacagacatatcaagctttctgtaataccatcgcaacgttcctggcaaatattcgtagagaattgacagcact ggaagtcaggattaaaaaacaaaaggagattaagaccctagccttactgaaggcagagctatcaccatggttacacaaga tagaggcggtacattctgtccatgtagagggaatagaggaagctgattggctacagaataactgtcatcgagcatcacat ctactcagtgtcctatacaaagctgtgttagagtatgatactttaggacattatgcaaatgaaatgcttgagttgatgct gccaatgtggatacagaccagtaagccgtatatagacatcatagacgagtggattactcacggaaacctagaggatccga tgaaagagttcctcatgagaaggaatgagaacgtaaagacattggatgagaaattttgggagacgtctttcaccgtctta ttaccgtcagactctactccttataagacaccttcaccagacaaaagactgtctctgaacaggacttcagtaggcacagg tggattaccctattgggcaccccagttcttagaaccaattgtattgaaggtcgtactagctggaaaatcaatggaaatgt tacaggatttaggaaagctgtcggaggtactaggtcatgaaggatcatcttttgaagatatgaaagctttggtggaatat cttgaaggaaacaacgcaaaaaatatcagacctcgttataaccaatcaaatcctttggatgtttatgtgcaagttcgact ctacagtatcgttgatttcgacgtgtcaaaaggaagattaacgttagctttgtcgttctttttcacctggcttgatgaac taaaatcctggaatcgaaccgaatttggaggaatttcgagggttcgtttacctgctgagtttgtttttatacccgatatg accctttatctatctttatcggagagaaacaaactgataggaaacgatgtaacgaaagaaaatgtggaaatcaatcattt agggcaagtttatgttgttgtaaacggagtattcgatatattatgtgagccagacataaaaatgtttccattcgacagac acacttgtcctttagaaataccagcaaatagaccacacaccgaagttagtctgaatacaaacagtgcagttttggatgaa gtccttcaaaagaattcaagatggttcttagaaagttcgacctatcaaattagcgagactgtaggaagataccacattct acgatataatattacatttcaccgatattccttcttcttgtctttgaatctagtagttccagtttgcattctgacaatcg taaacccgctggttttccttctgcctttaaattcaggtgaaaaagtttcgttttctataaccatcttgttgtcctttgta gtatttgtgtcatcagtgtcagacaagctgccggaagtgagcgagcccgtttgcatgttcaacacttttattattgctca actggtttacagttctctcattactttcactgtaattgtactgtcaagatcagaggcagacacagacacacaccttaaat ttatggactgcaattgttgtggcaataaaaatgaggtggattggataaaagacgaaaacgaagtatccgaaaagatgcag attgctccaacaaaaagtgacactaagaagaagtgtagcctggaatcttgtaccattgcatgtttcgttggatttatgct ctttgctgtcgtggaaataattgtcatggttggattggtggtgtga |
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Protein
| Protein ID | pfu_aug2.0_2074.1_15384.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2074.1_15384.t1 MSSLGSWSVENASLAETEENFGLCLQFASSNLRFHRFLDVDSHKVSKSLQGDPSLSAIMSDASTLYVVDDAPTQEEDSVV WLKRNVTVQYWHGMERDNSNDVENLANNWERYKEQCNPLYSRQSRIEMTEIQLMREVLWERYKEQCNPLYSRQSRIEMTE IQLMREVLWMLSGVKDSFVFVYDGQKHRVRDNIGVSHLTDNSLYSSLADFAKYGTFLHKLQSFTENVVDLSCSAASGRGD LVSQTYQAFCNTIATFLANIRRELTALEVRIKKQKEIKTLALLKAELSPWLHKIEAVHSVHVEGIEEADWLQNNCHRASH LLSVLYKAVLEYDTLGHYANEMLELMLPMWIQTSKPYIDIIDEWITHGNLEDPMKEFLMRRNENVKTLDEKFWETSFTVL LPSDSTPYKTPSPDKRLSLNRTSVGTGGLPYWAPQFLEPIVLKVVLAGKSMEMLQDLGKLSEVLGHEGSSFEDMKALVEY LEGNNAKNIRPRYNQSNPLDVYVQVRLYSIVDFDVSKGRLTLALSFFFTWLDELKSWNRTEFGGISRVRLPAEFVFIPDM TLYLSLSERNKLIGNDVTKENVEINHLGQVYVVVNGVFDILCEPDIKMFPFDRHTCPLEIPANRPHTEVSLNTNSAVLDE VLQKNSRWFLESSTYQISETVGRYHILRYNITFHRYSFFLSLNLVVPVCILTIVNPLVFLLPLNSGEKVSFSITILLSFV VFVSSVSDKLPEVSEPVCMFNTFIIAQLVYSSLITFTVIVLSRSEADTDTHLKFMDCNCCGNKNEVDWIKDENEVSEKMQ IAPTKSDTKKKCSLESCTIACFVGFMLFAVVEIIVMVGLVV |
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