Gene
| Gene Model ID | pfu_aug2.0_2074.1_15386 |
|---|---|
| Locus | scaffold2074.1 : 83426 ... 95128 : + |
| To GenomeBrowser | scaffold2074.1:83426..95128 |
| Genes list of scaffold | scaffold2074.1 |
| Synonym | pfu_aug1.0_811.1_58266 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| zinc finger | GO:0005488 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2074.1_15386.t1 | 1 | 1 | BTB | 8 | 69 | 2.0e-07 | 30.9 | 6.0e-10 | 4.7e-07 | 29.7 |
| pfu_aug2.0_2074.1_15386.t1 | 5 | 1 | zf-Di19 | 231 | 256 | 2.1e-11 | 43.7 | 0.043 | 33.0 | 4.6 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 1 | zf-C2H2 | 235 | 257 | 4.7e-35 | 117.8 | 0.00024 | 0.19 | 12.1 |
| pfu_aug2.0_2074.1_15386.t1 | 9 | 1 | zf-H2C2_2 | 235 | 245 | 4.9e-35 | 118.0 | 0.67 | 520.0 | 1.2 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 1 | zf-C2H2_jaz | 235 | 258 | 8.1e-19 | 67.2 | 0.00077 | 0.6 | 10.3 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 1 | zf-C2H2_4 | 237 | 257 | 2.9e-27 | 92.9 | 0.00039 | 0.3 | 11.5 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 1 | zf-C2H2_6 | 237 | 257 | 5.5e-12 | 45.1 | 0.22 | 180.0 | 2.2 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 1 | zf-met | 237 | 258 | 7.3e-12 | 45.0 | 3.9 | 3100.0 | -1.4 |
| pfu_aug2.0_2074.1_15386.t1 | 9 | 2 | zf-H2C2_2 | 250 | 259 | 4.9e-35 | 118.0 | 0.44 | 350.0 | 1.7 |
| pfu_aug2.0_2074.1_15386.t1 | 9 | 3 | zf-H2C2_2 | 400 | 414 | 4.9e-35 | 118.0 | 0.0059 | 4.6 | 7.7 |
| pfu_aug2.0_2074.1_15386.t1 | 5 | 2 | zf-Di19 | 404 | 426 | 2.1e-11 | 43.7 | 6.0e-06 | 0.0047 | 17.0 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 2 | zf-C2H2 | 405 | 427 | 4.7e-35 | 117.8 | 6.7e-07 | 0.00053 | 20.1 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 2 | zf-C2H2_4 | 405 | 427 | 2.9e-27 | 92.9 | 2.6e-07 | 0.00021 | 21.4 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 2 | zf-C2H2_jaz | 405 | 427 | 8.1e-19 | 67.2 | 0.0067 | 5.2 | 7.3 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 2 | zf-C2H2_6 | 405 | 414 | 5.5e-12 | 45.1 | 0.049 | 39.0 | 4.3 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 2 | zf-met | 405 | 424 | 7.3e-12 | 45.0 | 0.018 | 14.0 | 6.0 |
| pfu_aug2.0_2074.1_15386.t1 | 9 | 4 | zf-H2C2_2 | 419 | 441 | 4.9e-35 | 118.0 | 1.8e-06 | 0.0014 | 18.7 |
| pfu_aug2.0_2074.1_15386.t1 | 5 | 3 | zf-Di19 | 429 | 455 | 2.1e-11 | 43.7 | 3.1e-05 | 0.024 | 14.7 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 3 | zf-C2H2 | 430 | 452 | 4.7e-35 | 117.8 | 2.1e-09 | 1.6e-06 | 28.0 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 3 | zf-C2H2_4 | 430 | 452 | 2.9e-27 | 92.9 | 5.1e-09 | 3.9e-06 | 26.7 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 3 | zf-C2H2_jaz | 430 | 450 | 8.1e-19 | 67.2 | 2.2e-06 | 0.0017 | 18.4 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 3 | zf-C2H2_6 | 430 | 453 | 5.5e-12 | 45.1 | 5.4e-06 | 0.0042 | 16.9 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 3 | zf-met | 432 | 450 | 7.3e-12 | 45.0 | 1.8e-05 | 0.014 | 15.5 |
| pfu_aug2.0_2074.1_15386.t1 | 9 | 5 | zf-H2C2_2 | 444 | 469 | 4.9e-35 | 118.0 | 6.6e-09 | 5.2e-06 | 26.4 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 4 | zf-C2H2_6 | 457 | 480 | 5.5e-12 | 45.1 | 0.00019 | 0.15 | 12.0 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 4 | zf-C2H2 | 458 | 480 | 4.7e-35 | 117.8 | 1.1e-07 | 8.3e-05 | 22.7 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 4 | zf-C2H2_4 | 458 | 480 | 2.9e-27 | 92.9 | 0.00035 | 0.27 | 11.6 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 4 | zf-C2H2_jaz | 458 | 480 | 8.1e-19 | 67.2 | 3.1e-07 | 0.00024 | 21.1 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 4 | zf-met | 458 | 479 | 7.3e-12 | 45.0 | 4.5e-07 | 0.00036 | 20.6 |
| pfu_aug2.0_2074.1_15386.t1 | 5 | 4 | zf-Di19 | 458 | 508 | 2.1e-11 | 43.7 | 2.7e-05 | 0.021 | 14.9 |
| pfu_aug2.0_2074.1_15386.t1 | 9 | 6 | zf-H2C2_2 | 473 | 496 | 4.9e-35 | 118.0 | 2.4e-10 | 1.9e-07 | 31.0 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 5 | zf-C2H2 | 486 | 508 | 4.7e-35 | 117.8 | 3.3e-06 | 0.0026 | 18.0 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 5 | zf-C2H2_4 | 486 | 508 | 2.9e-27 | 92.9 | 0.0015 | 1.2 | 9.6 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 5 | zf-C2H2_jaz | 486 | 506 | 8.1e-19 | 67.2 | 0.015 | 12.0 | 6.2 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 5 | zf-C2H2_6 | 486 | 495 | 5.5e-12 | 45.1 | 0.12 | 97.0 | 3.0 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 5 | zf-met | 486 | 506 | 7.3e-12 | 45.0 | 0.005 | 3.9 | 7.8 |
| pfu_aug2.0_2074.1_15386.t1 | 9 | 7 | zf-H2C2_2 | 500 | 525 | 4.9e-35 | 118.0 | 3.5e-10 | 2.8e-07 | 30.5 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 6 | zf-C2H2_6 | 513 | 525 | 5.5e-12 | 45.1 | 0.00025 | 0.2 | 11.6 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 6 | zf-C2H2 | 514 | 537 | 4.7e-35 | 117.8 | 8.5e-09 | 6.7e-06 | 26.1 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 6 | zf-C2H2_4 | 514 | 537 | 2.9e-27 | 92.9 | 3.4e-07 | 0.00027 | 21.0 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 6 | zf-C2H2_jaz | 514 | 535 | 8.1e-19 | 67.2 | 8.7e-05 | 0.068 | 13.3 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 6 | zf-met | 515 | 535 | 7.3e-12 | 45.0 | 0.00028 | 0.22 | 11.7 |
| pfu_aug2.0_2074.1_15386.t1 | 5 | 5 | zf-Di19 | 515 | 564 | 2.1e-11 | 43.7 | 0.0013 | 1.0 | 9.5 |
| pfu_aug2.0_2074.1_15386.t1 | 9 | 8 | zf-H2C2_2 | 528 | 553 | 4.9e-35 | 118.0 | 4.6e-08 | 3.6e-05 | 23.8 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 7 | zf-C2H2_6 | 542 | 554 | 5.5e-12 | 45.1 | 0.0034 | 2.6 | 8.0 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 7 | zf-C2H2 | 543 | 566 | 4.7e-35 | 117.8 | 1.2e-06 | 0.00093 | 19.3 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 7 | zf-C2H2_4 | 543 | 566 | 2.9e-27 | 92.9 | 3.5e-06 | 0.0027 | 17.9 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 7 | zf-C2H2_jaz | 543 | 563 | 8.1e-19 | 67.2 | 0.00067 | 0.52 | 10.5 |
| pfu_aug2.0_2074.1_15386.t1 | 7 | 7 | zf-met | 544 | 563 | 7.3e-12 | 45.0 | 0.0038 | 3.0 | 8.1 |
| pfu_aug2.0_2074.1_15386.t1 | 9 | 9 | zf-H2C2_2 | 558 | 566 | 4.9e-35 | 118.0 | 0.75 | 590.0 | 1.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2074.1_15386.t1 | gi|676484366|ref|XP_009063323.1| | hypothetical protein LOTGIDRAFT_195501, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2074.1_15386.t1 | gi|551505147|ref|XP_005804109.1| | PREDICTED: oocyte zinc finger protein XlCOF22-like [Xiphophorus maculatus] | 4.00001e-40 |
| pfu_aug2.0_2074.1_15386.t1 | gi|551531328|ref|XP_005817116.1| | PREDICTED: zinc finger protein 235-like, partial [Xiphophorus maculatus] | 3.0e-39 |
Transcript
| Transcript ID | pfu_aug2.0_2074.1_15386.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2074.1_15386.t1 atgaataacagatactataatgaaccaggattatacgaacacagactaccaggtctggagggggatgccgtcaaacagat cgtcgaatttttctacacgtcggcggtttccgtagacgaggagagtgtttggacgttacttcctgctgccagtaaattgc atgtggcagaaattcaaaatctttgtacggaattcttattagcaaatttacaaatagaaaactgcctcaatattcacaag cttgccacagagtgcttatcgtcaaatttgctcaaggagagtacagattatattaaggacaattttgaaaagctattaga ggaggacagtttcttagatttagaatttgaggatgcaatgcctcatctcaagagacttggtgacacaggacttacgaacg gccaacttctacaagccatcaagtgctggataatagccgcagtggatgagagacaaatatatggatacaagattatccga caatttacaaacttggctcaaaaacttgaagaattcattccgtcggagtttttggaggtggaccaggatgaaattgagaa acctcttcgggtagaaaccagtccttcatacaccaataaaggaggaattccagtacaatcaaaacctgaccaatcaaatg ctagcttagagaaaaacaataatattcattcaaacatatcgaacggtgacgactcagaagctcatatgtgctctgaatgt gcagaggagtttgactcaaaaactgagttagaggaacatgtgaaaacacacaaagtattaatcaaacgtgaaaatgtctc acccacctcaagcaatcaaaatggactatcatccggtacacaaagctcaactcactccgggagatccagtgtgtcaccaa ggtctttcagcagtccggctccgaaaattttcggtccgtcgataatgaacgctaatgctacagcttcttccaagaatcct ttgctgaacagatctaacagtccgtatgaagactttatcaaaatgaacaatctagatgcatcaagaaacatgtcgtacct cagcggttctctcaaaaaccgatttgacgatgagtcgtcaggatcatacttcgataattatatgagagctagaggactcg acagtccaagttttggtacaagaacttcgtggtcacccctctccgcgacttctcggccagtgaattctggagtgcctgga gaagacctgaattttacgtgtccgatttgtggaaagaactatttggataaagattctctgaacaggcatgttgcgacaca ttccaatttcccatgtccagtgtgtgagaagacttatagcacaaagtccaaccttcaaacacacatgaaaaagcattctg atgagaacattttcagttgcagtacgtgcgacaaatcctttgttagtgcatctgtcctcaaagcacatctgcgtacgcat acgggagataaacctttcgtgtgtccaacatgtggagttgcctttgccaagaatatccacttgaggcgccatctatccat ccatactggaattaaaccacatgaatgtcacgtatgtggcaagcgattcagtcgatccgaccatctcaaacgacatatac aaagcattcatactcaggaccgacctcacatatgctcaatatgtaataaagatttcgtgcggaaatacgaacttaacaag cacatgaagcagtgtcattacggagtagctgtcatagatgacgactcggagatgaactcgagtcacgagtcatataataa tagttttagcgatcccccgtcacaaatcgttcgctcgctgttaccgagatttcctctactgaataattcctctgctgaat cctcaaagaattctgcatcagaatcaagagaggtaactcctacaaaaagtgacggaccgagtgaaacgagtagagatgca acgacaccgatagatatgtctcatccaataattaaggtggagccaacagattag |
|
Protein
| Protein ID | pfu_aug2.0_2074.1_15386.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2074.1_15386.t1 MNNRYYNEPGLYEHRLPGLEGDAVKQIVEFFYTSAVSVDEESVWTLLPAASKLHVAEIQNLCTEFLLANLQIENCLNIHK LATECLSSNLLKESTDYIKDNFEKLLEEDSFLDLEFEDAMPHLKRLGDTGLTNGQLLQAIKCWIIAAVDERQIYGYKIIR QFTNLAQKLEEFIPSEFLEVDQDEIEKPLRVETSPSYTNKGGIPVQSKPDQSNASLEKNNNIHSNISNGDDSEAHMCSEC AEEFDSKTELEEHVKTHKVLIKRENVSPTSSNQNGLSSGTQSSTHSGRSSVSPRSFSSPAPKIFGPSIMNANATASSKNP LLNRSNSPYEDFIKMNNLDASRNMSYLSGSLKNRFDDESSGSYFDNYMRARGLDSPSFGTRTSWSPLSATSRPVNSGVPG EDLNFTCPICGKNYLDKDSLNRHVATHSNFPCPVCEKTYSTKSNLQTHMKKHSDENIFSCSTCDKSFVSASVLKAHLRTH TGDKPFVCPTCGVAFAKNIHLRRHLSIHTGIKPHECHVCGKRFSRSDHLKRHIQSIHTQDRPHICSICNKDFVRKYELNK HMKQCHYGVAVIDDDSEMNSSHESYNNSFSDPPSQIVRSLLPRFPLLNNSSAESSKNSASESREVTPTKSDGPSETSRDA TTPIDMSHPIIKVEPTD |
|