Gene
| Gene Model ID | pfu_aug2.0_2086.1_21922 |
|---|---|
| Locus | scaffold2086.1 : 24266 ... 26900 : + |
| To GenomeBrowser | scaffold2086.1:24266..26900 |
| Genes list of scaffold | scaffold2086.1 |
| Synonym | pfu_aug1.0_4712.1_37945 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2086.1_21922.t1 | 3 | 1 | Ank_2 | 7 | 95 | 5.5e-33 | 113.1 | 4.5e-20 | 1.1e-16 | 60.9 |
| pfu_aug2.0_2086.1_21922.t1 | 6 | 1 | Ank | 7 | 30 | 7.9e-27 | 91.7 | 0.00035 | 0.86 | 9.5 |
| pfu_aug2.0_2086.1_21922.t1 | 6 | 1 | Ank_3 | 7 | 30 | 2.0e-20 | 70.8 | 0.00068 | 1.7 | 9.1 |
| pfu_aug2.0_2086.1_21922.t1 | 6 | 1 | Ank_5 | 7 | 30 | 1.1e-17 | 63.6 | 0.055 | 140.0 | 2.9 |
| pfu_aug2.0_2086.1_21922.t1 | 4 | 1 | Ank_4 | 8 | 31 | 1.7e-18 | 66.5 | 0.019 | 48.0 | 4.6 |
| pfu_aug2.0_2086.1_21922.t1 | 6 | 2 | Ank_5 | 41 | 81 | 1.1e-17 | 63.6 | 9.8e-09 | 2.4e-05 | 24.3 |
| pfu_aug2.0_2086.1_21922.t1 | 6 | 2 | Ank_3 | 44 | 67 | 2.0e-20 | 70.8 | 9.8e-05 | 0.24 | 11.7 |
| pfu_aug2.0_2086.1_21922.t1 | 4 | 2 | Ank_4 | 44 | 89 | 1.7e-18 | 66.5 | 5.4e-10 | 1.3e-06 | 28.7 |
| pfu_aug2.0_2086.1_21922.t1 | 6 | 2 | Ank | 45 | 72 | 7.9e-27 | 91.7 | 8.6e-09 | 2.1e-05 | 24.0 |
| pfu_aug2.0_2086.1_21922.t1 | 6 | 3 | Ank_5 | 60 | 93 | 1.1e-17 | 63.6 | 1.2e-06 | 0.003 | 17.7 |
| pfu_aug2.0_2086.1_21922.t1 | 6 | 3 | Ank | 75 | 95 | 7.9e-27 | 91.7 | 6.2e-07 | 0.0015 | 18.2 |
| pfu_aug2.0_2086.1_21922.t1 | 6 | 3 | Ank_3 | 75 | 93 | 2.0e-20 | 70.8 | 0.00016 | 0.38 | 11.1 |
| pfu_aug2.0_2086.1_21922.t1 | 3 | 2 | Ank_2 | 102 | 167 | 5.5e-33 | 113.1 | 9.7e-16 | 2.4e-12 | 47.0 |
| pfu_aug2.0_2086.1_21922.t1 | 6 | 4 | Ank_5 | 104 | 137 | 1.1e-17 | 63.6 | 6.6e-08 | 0.00016 | 21.7 |
| pfu_aug2.0_2086.1_21922.t1 | 6 | 4 | Ank_3 | 108 | 135 | 2.0e-20 | 70.8 | 8.2e-08 | 0.0002 | 21.2 |
| pfu_aug2.0_2086.1_21922.t1 | 6 | 4 | Ank | 111 | 136 | 7.9e-27 | 91.7 | 1.9e-09 | 4.7e-06 | 26.1 |
| pfu_aug2.0_2086.1_21922.t1 | 4 | 3 | Ank_4 | 111 | 159 | 1.7e-18 | 66.5 | 4.0e-11 | 9.8e-08 | 32.3 |
| pfu_aug2.0_2086.1_21922.t1 | 6 | 5 | Ank_5 | 130 | 170 | 1.1e-17 | 63.6 | 1.4e-05 | 0.034 | 14.4 |
| pfu_aug2.0_2086.1_21922.t1 | 6 | 5 | Ank | 139 | 168 | 7.9e-27 | 91.7 | 9.9e-05 | 0.24 | 11.2 |
| pfu_aug2.0_2086.1_21922.t1 | 6 | 5 | Ank_3 | 139 | 166 | 2.0e-20 | 70.8 | 5.0e-05 | 0.12 | 12.6 |
| pfu_aug2.0_2086.1_21922.t1 | 4 | 4 | Ank_4 | 139 | 204 | 1.7e-18 | 66.5 | 0.00043 | 1.1 | 9.9 |
| pfu_aug2.0_2086.1_21922.t1 | 6 | 6 | Ank_5 | 187 | 210 | 1.1e-17 | 63.6 | 0.13 | 320.0 | 1.7 |
| pfu_aug2.0_2086.1_21922.t1 | 3 | 3 | Ank_2 | 190 | 210 | 5.5e-33 | 113.1 | 0.06 | 150.0 | 2.8 |
| pfu_aug2.0_2086.1_21922.t1 | 6 | 6 | Ank_3 | 190 | 210 | 2.0e-20 | 70.8 | 0.034 | 84.0 | 3.8 |
| pfu_aug2.0_2086.1_21922.t1 | 6 | 6 | Ank | 191 | 214 | 7.9e-27 | 91.7 | 0.043 | 110.0 | 2.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2086.1_21922.t1 | gi|676425891|ref|XP_009044448.1| | hypothetical protein LOTGIDRAFT_109659 [Lottia gigantea] | 2.0e-18 |
| pfu_aug2.0_2086.1_21922.t1 | gi|123388394|ref|XP_001299566.1| | ankyrin repeat protein [Trichomonas vaginalis G3] | 2.0e-16 |
| pfu_aug2.0_2086.1_21922.t1 | gi|123471591|ref|XP_001318994.1| | ankyrin repeat protein [Trichomonas vaginalis G3] | 1.0e-15 |
| pfu_aug2.0_2086.1_21922.t1 | gi|594689822|ref|XP_007192290.1| | PREDICTED: ankycorbin isoform X2 [Balaenoptera acutorostrata scammoni] | 3.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_2086.1_21922.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2086.1_21922.t1 atggacctatcggcagatctgtaccatgcggttgttaacaatgatgtggaaaaattaacttccctacttgacaatggcgc aaatccgaatgaattttaccaagatatggctaatattagctctaaacatatactgcatatatgcgccagtaaaggccatg ttaactgtgcaaggttgcttgtggaccatggcgcaaggatattgtcacgtgacaattggcgcatgacacccctaatgtac gccgccatttcaaactgtcatcaaataatcgaatattttatgtcgatatgtccagaaacggcggaagctggggataattt cgggaagaaacccctccattacgctctggagtacgatagtgtggactctgttagagttcttctaaatcacggagctgacg tgaactatttgagaggtagatcgcctttattagttgctataaaccagaaagacatagacacggtccgtgtattgatatcc ggaaactgtaacttgtacttacgcggaaactcactgacgtattctacggacaacgacaccattttgaacgacgtggactc attcgagatggctgttgctttccgccaatgggagatcgtgaatcttctagtccttgcgggatataatctctctcatataa cgtaccttgctgattatggagccctggatacatcactgcacggcttcgatgaggtaccctggttcctctcctacttaagg gagattgctagtcagccgatgtcattgtttctacaaacttgtctgcttatcagaaggcagttgaagacatgtattcaaga caaggcagagttacttccgcttcctgtttcgttgaagcaatcagtatctctgtgtaattatgacgattatggcgtagtat tttcttag |
|
Protein
| Protein ID | pfu_aug2.0_2086.1_21922.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2086.1_21922.t1 MDLSADLYHAVVNNDVEKLTSLLDNGANPNEFYQDMANISSKHILHICASKGHVNCARLLVDHGARILSRDNWRMTPLMY AAISNCHQIIEYFMSICPETAEAGDNFGKKPLHYALEYDSVDSVRVLLNHGADVNYLRGRSPLLVAINQKDIDTVRVLIS GNCNLYLRGNSLTYSTDNDTILNDVDSFEMAVAFRQWEIVNLLVLAGYNLSHITYLADYGALDTSLHGFDEVPWFLSYLR EIASQPMSLFLQTCLLIRRQLKTCIQDKAELLPLPVSLKQSVSLCNYDDYGVVFS |
|