Gene
| Gene Model ID | pfu_aug2.0_209.1_30427 |
|---|---|
| Locus | scaffold209.1 : 229237 ... 271125 : - |
| To GenomeBrowser | scaffold209.1:229237..271125 |
| Genes list of scaffold | scaffold209.1 |
| Synonym | pfu_aug1.0_10048.1_53470 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_209.1_30427.t3 | 1 | 1 | DEP | 32 | 102 | 7.2e-09 | 35.2 | 6.1e-12 | 1.8e-08 | 33.9 |
| pfu_aug2.0_209.1_30427.t3 | 1 | 1 | G-gamma | 223 | 285 | 9.4e-08 | 31.6 | 9.2e-11 | 2.7e-07 | 30.2 |
| pfu_aug2.0_209.1_30427.t3 | 1 | 1 | RGS | 306 | 425 | 8.6e-26 | 90.3 | 8.6e-29 | 2.5e-25 | 88.8 |
Transcript
| Transcript ID | pfu_aug2.0_209.1_30427.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_209.1_30427.t1 atggttctgaatatctttcagccgtattcaccagctcatgaaaagatggagaagatgattctggaaatgtctaaaagcga aaatgacaacgggatgatcatgagggccaaacgagggatattttcggattcctttcagtcctttactggagcggatttaa tagagtggatcaagcgtcggtacagtatccaggacatcagagaggccacctccctagcctccatgttatgtctctatggt tatatataccctgtggacttcaggtcatatgtggtcaaagatgaccgatctacggagtatagattccagaccccgtatta ttggccatataaaacagatggaacagcagatagtatcaaatatgcaatatacttacagaaaagaagtttaagaaataaac agaagcatggactagaagattatgaactggaagcatacgataaacttatgaaggttttctgtgataaaaaagaattcatc gagattcaagccagggaacaagtacatgagattaagaagaggagacgaccagacaaatttctgacagaccaacaggaaag ggcattctggagagtgaacagacctccgcctggtacaacacggtgtctagaggagggacctaagcggtacttccagccca gtcaaatggaggcaaaacgaaggaaaaacaaggagggctacagattagagatcaacttcctgaggaaagctctggaaaaa ccaagattaaagttctccaaagtctttgattgttattgtatgtggaatgaccagtataaagcatacgacccgtttatgga tgtcacatcgacacagccctcaaatccctggatctcagacgacactacgtactgggaagctaatgcccatgatattgtga ctcctacagagctgcgggtgaagaaatgggcaataagcttccatgatctcatttctgatgaaattggaagatatgaattt gctgaatttttaaagaaggaatatagtgtggagaatatactcttttttaacaaggttgaggaactacataaagctccagt ctcaaggattaaggatctcgtatctgaaatacacagggtttttcttgacaaaggtgctgaaagagaaataaatatagata gcaaaactttagaagaagtaaataatagtcgacatttccaaggaaaagttcacacgcttagatatgtatttgatcctgca caagaacacgtatacctcttgatgaagaaagacagttacacgcgctatctacgatcggaacaatataagaaactattgga gaaagctcatagtcaacccattaaaaggagatttttcaactttggtggaagtggcaagatgaacaaaagacaaactccaa gtcctaaattaggtcgtagaagggacagtaactccagcgatcgtgacgctaactccgatatcagcttggattctcctgtt caccaccccaacctccctcaacattcctacagcactggtaatctgaaagagttagatgtacggcaaacaccaacagcctc aaggatatcaaagaattttaattag |
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| Transcript ID | pfu_aug2.0_209.1_30427.t2 |
| Definition | - |
>pfu_aug2.0_209.1_30427.t2 atggataaaacaagcagtaaaacaagacagaagattttttcgaagatggagaagatgattctggaaatgtctaaaagcga aaatgacaacgggatgatcatgagggccaaacgagggatattttcggattcctttcagtcctttactggagcggatttaa tagagtggatcaagcgtcggtacagtatccaggacatcagagaggccacctccctagcctccatgttatgtctctatggt tatatataccctgtggacttcaggtcatatgtggtcaaagatgaccgatctacggagtatagattccagaccccgtatta ttggccatataaaacagatggaacagcagatagtatcaaatatgcaatatacttacagaaaagaagtttaagaaataaac agaagcatggactagaagattatgaactggaagcatacgataaacttatgaaggttttctgtgataaaaaagaattcatc gagattcaagccagggaacaagtacatgagattaagaagaggagacgaccagacaaatttctgacagaccaacaggaaag ggcattctggagagtgaacagacctccgcctggtacaacacggtgtctagaggagggacctaagcggtacttccagccca gtcaaatggaggcaaaacgaaggaaaaacaaggagggctacagattagagatcaacttcctgaggaaagctctggaaaaa ccaagattaaagttctccaaagtctttgattgttattgtatgtggaatgaccagtataaagcatacgacccgtttatgga tgtcacatcgacacagccctcaaatccctggatctcagacgacactacgtactgggaagctaatgcccatgatattgtga ctcctacagagctgcgggtgaagaaatgggcaataagcttccatgatctcatttctgatgaaattggaagatatgaattt gctgaatttttaaagaaggaatatagtgtggagaatatactcttttttaacaaggttgaggaactacataaagctccagt ctcaaggattaaggatctcgtatctgaaatacacagggtttttcttgacaaaggtgctgaaagagaaataaatatagata gcaaaactttagaagaagtaaataatagtcgacatttccaaggaaaagttcacacgcttagatatgtatttgatcctgca caagaacacgtatacctcttgatgaagaaagacagttacacgcgctatctacgatcggaacaatataagaaactattgga gaaagctcatagtcaacccattaaaaggagatttttcaactttggtggaagtggcaagatgaacaaaagacaaactccaa gtcctaaattaggtcgtagaagggacagtaactccagcgatcgtgacgctaactccgatatcagcttggattctcctgtt caccaccccaacctccctcaacattcctacagcactggtaatctgaaagagttagatgtacggcaaacaccaacagcctc aaggatatcaaagaattttaattag |
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| Transcript ID | pfu_aug2.0_209.1_30427.t3 |
| Definition | - |
>pfu_aug2.0_209.1_30427.t3 atggttctgaatatctttcagccgtattcaccagctcatgaaaagatggagaagatgattctggaaatgtctaaaagcga aaatgacaacgggatgatcatgagggccaaacgagggatattttcggattcctttcagtcctttactggagcggatttaa tagagtggatcaagcgtcggtacagtatccaggacatcagagaggccacctccctagcctccatgttatgtctctatggt tatatataccctgtggacttcaggtcatatgtggtcaaagatgaccgatctacggagtatagattccagaccccgtatta ttggccatataaaacagatggaacagcagatagtatcaaatatgcaatatacttacagaaaagaagtttaagaaataaac agaagcatggactagaagattatgaactggaagcatacgataaacttatgaaggttttctgtgataaaaaagaattcatc gagattcaagccagggaacaagtacatgagattaagaagaggagacgaccagacaaatttctgacagaccaacaggaaag ggcattctggagagtgaacagacctccgcctggtacaacacggtgtctagaggagggacctaagcggtacttccagccca gtcaaatggaggcaaaacgaaggaaaaacaaggagggctacagattagagatcaacttcctgaggaaagctctggaaaaa ccaagattaaagttctccaaagtctttgattgttattgtatgtggaatgaccagtataaagcatacgacccgtttatgga tgtcacatcgacacagccctcaaatccctggatctcagacgacactacgtactgggaagctaatgcccatgatattgtga ctcctacagagctgcgggtgaagaaatgggcaataagcttccatgatctcatttctgatgaaattggaagatatgaattt gctgaatttttaaagaaggaatatagtgtggagaatatactcttttttaacaaggttgaggaactacataaagctccagt ctcaaggattaaggatctcgtatctgaaatacacagggtttttcttgacaaaggtgctgaaagagaaataaatatagata gcaaaactttagaagaagtaaataatagtcgacatttccaaggaaaagttcacacgcttagatatgtatttgatcctgca caagaacacgtatacctcttgatgaagaaagacagttacacgcgctatctacgatcggaacaatataagaaactattgga gaaagctcatagtcaacccattaaaaggagagagattcagatttttcaactttggtggaagtggcaagatgaacaaaaga caaactccaagtcctaa |
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Protein
| Protein ID | pfu_aug2.0_209.1_30427.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_209.1_30427.t1 MVLNIFQPYSPAHEKMEKMILEMSKSENDNGMIMRAKRGIFSDSFQSFTGADLIEWIKRRYSIQDIREATSLASMLCLYG YIYPVDFRSYVVKDDRSTEYRFQTPYYWPYKTDGTADSIKYAIYLQKRSLRNKQKHGLEDYELEAYDKLMKVFCDKKEFI EIQAREQVHEIKKRRRPDKFLTDQQERAFWRVNRPPPGTTRCLEEGPKRYFQPSQMEAKRRKNKEGYRLEINFLRKALEK PRLKFSKVFDCYCMWNDQYKAYDPFMDVTSTQPSNPWISDDTTYWEANAHDIVTPTELRVKKWAISFHDLISDEIGRYEF AEFLKKEYSVENILFFNKVEELHKAPVSRIKDLVSEIHRVFLDKGAEREINIDSKTLEEVNNSRHFQGKVHTLRYVFDPA QEHVYLLMKKDSYTRYLRSEQYKKLLEKAHSQPIKRRFFNFGGSGKMNKRQTPSPKLGRRRDSNSSDRDANSDISLDSPV HHPNLPQHSYSTGNLKELDVRQTPTASRISKNFN |
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| Protein ID | pfu_aug2.0_209.1_30427.t2 |
| Definition | - |
>pfu_aug2.0_209.1_30427.t2 MDKTSSKTRQKIFSKMEKMILEMSKSENDNGMIMRAKRGIFSDSFQSFTGADLIEWIKRRYSIQDIREATSLASMLCLYG YIYPVDFRSYVVKDDRSTEYRFQTPYYWPYKTDGTADSIKYAIYLQKRSLRNKQKHGLEDYELEAYDKLMKVFCDKKEFI EIQAREQVHEIKKRRRPDKFLTDQQERAFWRVNRPPPGTTRCLEEGPKRYFQPSQMEAKRRKNKEGYRLEINFLRKALEK PRLKFSKVFDCYCMWNDQYKAYDPFMDVTSTQPSNPWISDDTTYWEANAHDIVTPTELRVKKWAISFHDLISDEIGRYEF AEFLKKEYSVENILFFNKVEELHKAPVSRIKDLVSEIHRVFLDKGAEREINIDSKTLEEVNNSRHFQGKVHTLRYVFDPA QEHVYLLMKKDSYTRYLRSEQYKKLLEKAHSQPIKRRFFNFGGSGKMNKRQTPSPKLGRRRDSNSSDRDANSDISLDSPV HHPNLPQHSYSTGNLKELDVRQTPTASRISKNFN |
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| Protein ID | pfu_aug2.0_209.1_30427.t3 |
| Definition | - |
>pfu_aug2.0_209.1_30427.t3 MVLNIFQPYSPAHEKMEKMILEMSKSENDNGMIMRAKRGIFSDSFQSFTGADLIEWIKRRYSIQDIREATSLASMLCLYG YIYPVDFRSYVVKDDRSTEYRFQTPYYWPYKTDGTADSIKYAIYLQKRSLRNKQKHGLEDYELEAYDKLMKVFCDKKEFI EIQAREQVHEIKKRRRPDKFLTDQQERAFWRVNRPPPGTTRCLEEGPKRYFQPSQMEAKRRKNKEGYRLEINFLRKALEK PRLKFSKVFDCYCMWNDQYKAYDPFMDVTSTQPSNPWISDDTTYWEANAHDIVTPTELRVKKWAISFHDLISDEIGRYEF AEFLKKEYSVENILFFNKVEELHKAPVSRIKDLVSEIHRVFLDKGAEREINIDSKTLEEVNNSRHFQGKVHTLRYVFDPA QEHVYLLMKKDSYTRYLRSEQYKKLLEKAHSQPIKRREIQIFQLWWKWQDEQKTNSKS |
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