Gene
| Gene Model ID | pfu_aug2.0_209.1_30431 |
|---|---|
| Locus | scaffold209.1 : 315726 ... 323438 : + |
| To GenomeBrowser | scaffold209.1:315726..323438 |
| Genes list of scaffold | scaffold209.1 |
| Synonym | pfu_aug1.0_3370.1_59209 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_209.1_30431.t1 | 15 | 1 | LRR_1 | 13 | 21 | 5.9e-22 | 74.3 | 6.0 | 15000.0 | -3.6 |
| pfu_aug2.0_209.1_30431.t1 | 8 | 1 | LRR_4 | 33 | 74 | 5.9e-40 | 134.2 | 1.3e-10 | 3.2e-07 | 29.8 |
| pfu_aug2.0_209.1_30431.t1 | 7 | 1 | LRR_8 | 34 | 91 | 6.9e-37 | 125.0 | 1.3e-12 | 3.2e-09 | 36.4 |
| pfu_aug2.0_209.1_30431.t1 | 14 | 1 | LRR_7 | 34 | 49 | 1.2e-10 | 39.7 | 0.53 | 1300.0 | 0.4 |
| pfu_aug2.0_209.1_30431.t1 | 15 | 2 | LRR_1 | 35 | 55 | 5.9e-22 | 74.3 | 0.019 | 47.0 | 4.5 |
| pfu_aug2.0_209.1_30431.t1 | 15 | 3 | LRR_1 | 57 | 78 | 5.9e-22 | 74.3 | 0.0051 | 13.0 | 6.3 |
| pfu_aug2.0_209.1_30431.t1 | 14 | 2 | LRR_7 | 57 | 71 | 1.2e-10 | 39.7 | 4.4 | 11000.0 | -2.4 |
| pfu_aug2.0_209.1_30431.t1 | 14 | 3 | LRR_7 | 79 | 93 | 1.2e-10 | 39.7 | 0.032 | 78.0 | 4.1 |
| pfu_aug2.0_209.1_30431.t1 | 8 | 2 | LRR_4 | 80 | 121 | 5.9e-40 | 134.2 | 5.9e-10 | 1.5e-06 | 27.7 |
| pfu_aug2.0_209.1_30431.t1 | 15 | 4 | LRR_1 | 81 | 102 | 5.9e-22 | 74.3 | 0.00086 | 2.1 | 8.6 |
| pfu_aug2.0_209.1_30431.t1 | 7 | 2 | LRR_8 | 95 | 122 | 6.9e-37 | 125.0 | 0.00019 | 0.47 | 10.2 |
| pfu_aug2.0_209.1_30431.t1 | 14 | 4 | LRR_7 | 103 | 120 | 1.2e-10 | 39.7 | 0.27 | 660.0 | 1.3 |
| pfu_aug2.0_209.1_30431.t1 | 15 | 5 | LRR_1 | 106 | 124 | 5.9e-22 | 74.3 | 0.0035 | 8.6 | 6.8 |
| pfu_aug2.0_209.1_30431.t1 | 8 | 3 | LRR_4 | 129 | 163 | 5.9e-40 | 134.2 | 1.5e-05 | 0.036 | 13.7 |
| pfu_aug2.0_209.1_30431.t1 | 15 | 6 | LRR_1 | 130 | 150 | 5.9e-22 | 74.3 | 0.0033 | 8.0 | 6.9 |
| pfu_aug2.0_209.1_30431.t1 | 7 | 3 | LRR_8 | 131 | 186 | 6.9e-37 | 125.0 | 1.6e-10 | 4.1e-07 | 29.6 |
| pfu_aug2.0_209.1_30431.t1 | 14 | 5 | LRR_7 | 131 | 143 | 1.2e-10 | 39.7 | 0.41 | 1000.0 | 0.8 |
| pfu_aug2.0_209.1_30431.t1 | 14 | 6 | LRR_7 | 149 | 167 | 1.2e-10 | 39.7 | 0.0027 | 6.8 | 7.3 |
| pfu_aug2.0_209.1_30431.t1 | 8 | 4 | LRR_4 | 153 | 186 | 5.9e-40 | 134.2 | 2.4e-09 | 6.0e-06 | 25.7 |
| pfu_aug2.0_209.1_30431.t1 | 15 | 7 | LRR_1 | 153 | 169 | 5.9e-22 | 74.3 | 0.00055 | 1.4 | 9.2 |
| pfu_aug2.0_209.1_30431.t1 | 14 | 7 | LRR_7 | 174 | 187 | 1.2e-10 | 39.7 | 0.0045 | 11.0 | 6.7 |
| pfu_aug2.0_209.1_30431.t1 | 15 | 8 | LRR_1 | 175 | 194 | 5.9e-22 | 74.3 | 0.019 | 46.0 | 4.6 |
| pfu_aug2.0_209.1_30431.t1 | 7 | 4 | LRR_8 | 219 | 258 | 6.9e-37 | 125.0 | 1.3e-08 | 3.1e-05 | 23.6 |
| pfu_aug2.0_209.1_30431.t1 | 8 | 5 | LRR_4 | 224 | 262 | 5.9e-40 | 134.2 | 2.1e-10 | 5.3e-07 | 29.1 |
| pfu_aug2.0_209.1_30431.t1 | 15 | 9 | LRR_1 | 224 | 242 | 5.9e-22 | 74.3 | 0.0022 | 5.5 | 7.4 |
| pfu_aug2.0_209.1_30431.t1 | 14 | 8 | LRR_7 | 224 | 235 | 1.2e-10 | 39.7 | 0.011 | 27.0 | 5.5 |
| pfu_aug2.0_209.1_30431.t1 | 7 | 5 | LRR_8 | 247 | 304 | 6.9e-37 | 125.0 | 1.3e-10 | 3.1e-07 | 30.0 |
| pfu_aug2.0_209.1_30431.t1 | 15 | 10 | LRR_1 | 248 | 262 | 5.9e-22 | 74.3 | 0.0019 | 4.6 | 7.6 |
| pfu_aug2.0_209.1_30431.t1 | 14 | 9 | LRR_7 | 248 | 261 | 1.2e-10 | 39.7 | 0.0043 | 11.0 | 6.7 |
| pfu_aug2.0_209.1_30431.t1 | 8 | 6 | LRR_4 | 270 | 304 | 5.9e-40 | 134.2 | 2.0e-10 | 5.0e-07 | 29.1 |
| pfu_aug2.0_209.1_30431.t1 | 7 | 6 | LRR_8 | 270 | 312 | 6.9e-37 | 125.0 | 1.9e-08 | 4.7e-05 | 23.0 |
| pfu_aug2.0_209.1_30431.t1 | 15 | 11 | LRR_1 | 270 | 291 | 5.9e-22 | 74.3 | 2.2e-05 | 0.054 | 13.5 |
| pfu_aug2.0_209.1_30431.t1 | 14 | 10 | LRR_7 | 270 | 285 | 1.2e-10 | 39.7 | 0.001 | 2.6 | 8.6 |
| pfu_aug2.0_209.1_30431.t1 | 8 | 7 | LRR_4 | 293 | 332 | 5.9e-40 | 134.2 | 4.1e-07 | 0.001 | 18.6 |
| pfu_aug2.0_209.1_30431.t1 | 15 | 12 | LRR_1 | 293 | 316 | 5.9e-22 | 74.3 | 0.0031 | 7.7 | 6.9 |
| pfu_aug2.0_209.1_30431.t1 | 14 | 11 | LRR_7 | 293 | 305 | 1.2e-10 | 39.7 | 0.0039 | 9.5 | 6.9 |
| pfu_aug2.0_209.1_30431.t1 | 14 | 12 | LRR_7 | 317 | 333 | 1.2e-10 | 39.7 | 0.85 | 2100.0 | -0.2 |
| pfu_aug2.0_209.1_30431.t1 | 7 | 7 | LRR_8 | 318 | 373 | 6.9e-37 | 125.0 | 1.9e-08 | 4.6e-05 | 23.0 |
| pfu_aug2.0_209.1_30431.t1 | 15 | 13 | LRR_1 | 318 | 338 | 5.9e-22 | 74.3 | 0.02 | 49.0 | 4.5 |
| pfu_aug2.0_209.1_30431.t1 | 14 | 13 | LRR_7 | 340 | 356 | 1.2e-10 | 39.7 | 0.0016 | 4.0 | 8.0 |
| pfu_aug2.0_209.1_30431.t1 | 8 | 8 | LRR_4 | 341 | 374 | 5.9e-40 | 134.2 | 2.5e-05 | 0.063 | 12.9 |
| pfu_aug2.0_209.1_30431.t1 | 15 | 14 | LRR_1 | 341 | 360 | 5.9e-22 | 74.3 | 0.0011 | 2.6 | 8.4 |
| pfu_aug2.0_209.1_30431.t1 | 14 | 14 | LRR_7 | 364 | 376 | 1.2e-10 | 39.7 | 0.5 | 1200.0 | 0.5 |
| pfu_aug2.0_209.1_30431.t1 | 15 | 15 | LRR_1 | 365 | 377 | 5.9e-22 | 74.3 | 0.051 | 120.0 | 3.2 |
| pfu_aug2.0_209.1_30431.t1 | 6 | 1 | Gelsolin | 518 | 589 | 0.0 | 194.4 | 1.3e-14 | 3.2e-11 | 42.7 |
| pfu_aug2.0_209.1_30431.t1 | 6 | 2 | Gelsolin | 631 | 702 | 0.0 | 194.4 | 1.9e-12 | 4.8e-09 | 35.7 |
| pfu_aug2.0_209.1_30431.t1 | 6 | 3 | Gelsolin | 746 | 816 | 0.0 | 194.4 | 2.0e-16 | 5.0e-13 | 48.5 |
| pfu_aug2.0_209.1_30431.t1 | 6 | 4 | Gelsolin | 909 | 993 | 0.0 | 194.4 | 0.0033 | 8.2 | 6.2 |
| pfu_aug2.0_209.1_30431.t1 | 6 | 5 | Gelsolin | 1041 | 1110 | 0.0 | 194.4 | 8.5e-06 | 0.021 | 14.5 |
| pfu_aug2.0_209.1_30431.t1 | 6 | 6 | Gelsolin | 1146 | 1200 | 0.0 | 194.4 | 2.0e-13 | 5.1e-10 | 38.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_209.1_30431.t1 | gi|524882169|ref|XP_005097729.1| | PREDICTED: protein flightless-1 homolog isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_209.1_30431.t1 | gi|71894773|ref|NP_001025806.1| | protein flightless-1 homolog [Gallus gallus] | 0.0 |
| pfu_aug2.0_209.1_30431.t1 | gi|733911020|ref|XP_010718127.1| | PREDICTED: protein flightless-1 homolog, partial [Meleagris gallopavo] | 0.0 |
| pfu_aug2.0_209.1_30431.t1 | gi|543358297|ref|XP_005523117.1| | PREDICTED: protein flightless-1 homolog isoform X1 [Pseudopodoces humilis] | 0.0 |
| pfu_aug2.0_209.1_30431.t1 | gi|242003646|ref|XP_002422811.1| | flightless-I, putative [Pediculus humanus corporis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_209.1_30431.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_209.1_30431.t1 atggcatcgacgggggtgctgcctttcgtgagaggcatagacctcacaagtaatgattttcaagcagaaaagttccctaa acagatggcggaaatgacaggactcaggtggctacgtttaagcaagacaggattagagaagatcccagatgctttaggca agctgaaaaaacttgaacaccttaccataacaaaaaacaacatctcaagtttgggtgatgatttagaagaattaccagct ttacgcactttgaattgtagaaataacaaacttaaagacagcggcattccaaaggatatcttcaagcttgaggatttgtc tgtggtagatttaagttacaatgaattacaggatgttccccctacactagaaaaagccaaaaactgcatagtgcttaact taggacataatcatatagagatgatcccaaatcaactgttcatcaacctgacagatctgatatttgttgacctcagtaat aataatctagagacattgccaccgcagatgagacgtcttactaatttgaggacattgattttaaacaacaaccctcttat ccatgcccagctcaggcaacttccagcccttgttgaactggaaacacttcacatgaagaatgcgcaaaggacgatagcaa actttccatcaggattagatacgcttgttcatttgcaagatttggatctgtcgtgtaacgagttaccgagagtgcctgaa actctgtacaagcttgcatcagtgaagaggcttaacctcagcagtaatcaaattactgagctttctttggtgattgattc atgggttaacttggaaacattgaatttatctcgaaatatgctgaaaagtcttccatcatccctttacaaactgcagtctc taaagaagctttacttgaactgcaatcaactagactttgatggaatccctgctaacataggcaaactacataacctggag atcttcagtgcagcaaataacaatcttgaaatgattcctgaaggactttgcagatgtggaaagttgaaaaagttgattct caacgggaataatttggtaacactgccagatattcttcatctgctacctgaacttgagaccttggatgtgcgagataatc cgaatctagtcatgccaccgaaaccagaggagctgaggaagagttttgagtactacaacatagacttttcattgagtgga cagttgagacaggcaggtgcccctcctcctccgtctacagaggagtcacctgtccacaagagtgaccctgtagcaagaaa actgaggctcagaaggaggagggatggacaagaaagcgaaaaggtgctaaaaggtatgagagatgttgcaaagaataaaa cggatgctttaacagccaagcttgaggaagaagcaaaagaacccctcaaaccaaagaaatggaatgagcatctgcagcga cctcacttagactatagtgagatctttgatgaagaggttggacagattcctgggttgtcttgttgggagatagagaattt cttacctaaccaagtggaggagggtctgattgggaaattttatgaagcggactgttatattgtgttgcgtactttcatca atgattctaacagcttggattggcagatatggtactggataggagaacaagcgactcttgataagaaagcttgctcagct atacatgctgtaaatttgagaaatctgttgggagctgagtgcagaactatacgagaggagatgaatgatgaaaatgagga cttcctggagctttttgataatggcatatcatatattgaaggtggacgtacagctagtggatttttcactgttgaaaaca tcacatatgaagtcaagatgtatagaacttggggacaacagaaaatctcaatggaaagggttaggccaaggacaacaagc ttagatagaaggtttgtgttcctggtagatgcaggtactgacatttatatttggacaggtaaacttgcaaaaggtgtaac aaaaacaaaaaccagacttgttgcagaaaagatcaacaaaaatgagagaaagggcagttctgagattcatatggaataca tgggagaagaatcatcaggattctgggagcttcttggcacccaaccgtctgcaccgataggagaaattgtgtcggaagac tttgaaccagcagagccaagactgtataaagtaggacttggaatgggatatctagaattaccacaagttgaaattcctaa aaagagattagttcacagcttgttagatacaaagaatgtgtacattctggactgcaagtcagatttgtatgtgtggatcg gaaagaagtctaccagacttgttagagctgctgcactgaagctttctcaagagctgaatttcatgattgacagaccccca tgctgttctgttacaagatgcctacagggtacagagccacaaatttttaagactaaattcattggatgggatgatgtgtt agctgttgactttaccagaactgctgagtctgtcagcagacgaggtgctgatctgaaggtcatcatggagagagacaaaa tgaagactgacttatctgctctcttcatgcctagacagcctgcaatgccgtttgacgaagctgagcaggtgatgcaggac tggaatgatgatatggatggaatggaagcgtttgtacttgaggacaagaagtttgtacgtctgccagatgatgagttagg gatcttccacacccatgattgctatgtgttcctctgtagatactgggtgcctgttgatgagcctgaggatgaggatttag atgatgatgaggaacctccagaagaggacactaaatgtgttgtgtacttctggcaagggaggatggcctcaaacatggga tggctgaccttcaccttcagcttgcagaaaaagtttgaatcacttttcggagataaacttgaggttgtgaggacacatca gcagcaagaaaacctcaagttcctctctcatttcaagagagaatttgtcatcagagatggaaagagaaaaacaccaagtg caccagccgttaaaccgtctatagagttcttccatctacgtgccaatggtggtccaattgccactaggtgcattcagatt caaccaaatgcatctttactgaattcctgtttttgttacatcttgatggtgccttttgacagtgaggacttgagaggcgt ggtctatgtatggatagggaaaaaggcagagcaccaggaggctgaactagcagagaaaatagcgtacaagatgtatccag ataactacacagtacagatgatcaatgaaggggaggagccagagaacttcttctgggttggaattggtggaagaaaaccg tatgattctgatgccacctatatgaagtttgcccgcttgttcaggtgctccaatgaaaaaggatacttcactgtgtcaga gaaatgtgcagacttttgtcaggatgatcttgctgatgatgatgtcatgctacttgacaatggggagcaagtgttcttgt gggttggaaggaagacaagtgacgttgaaattaaactagcgtttaagagcgcccaggtttacatccaacatctaaggaac aaacaacctgatagacctagaaagttactgctagccatgaaatacaaggagaatagaagattcaccaagtgtttccatgg atggggtaaatacaaggaagtgctacagtga |
|
Protein
| Protein ID | pfu_aug2.0_209.1_30431.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_209.1_30431.t1 MASTGVLPFVRGIDLTSNDFQAEKFPKQMAEMTGLRWLRLSKTGLEKIPDALGKLKKLEHLTITKNNISSLGDDLEELPA LRTLNCRNNKLKDSGIPKDIFKLEDLSVVDLSYNELQDVPPTLEKAKNCIVLNLGHNHIEMIPNQLFINLTDLIFVDLSN NNLETLPPQMRRLTNLRTLILNNNPLIHAQLRQLPALVELETLHMKNAQRTIANFPSGLDTLVHLQDLDLSCNELPRVPE TLYKLASVKRLNLSSNQITELSLVIDSWVNLETLNLSRNMLKSLPSSLYKLQSLKKLYLNCNQLDFDGIPANIGKLHNLE IFSAANNNLEMIPEGLCRCGKLKKLILNGNNLVTLPDILHLLPELETLDVRDNPNLVMPPKPEELRKSFEYYNIDFSLSG QLRQAGAPPPPSTEESPVHKSDPVARKLRLRRRRDGQESEKVLKGMRDVAKNKTDALTAKLEEEAKEPLKPKKWNEHLQR PHLDYSEIFDEEVGQIPGLSCWEIENFLPNQVEEGLIGKFYEADCYIVLRTFINDSNSLDWQIWYWIGEQATLDKKACSA IHAVNLRNLLGAECRTIREEMNDENEDFLELFDNGISYIEGGRTASGFFTVENITYEVKMYRTWGQQKISMERVRPRTTS LDRRFVFLVDAGTDIYIWTGKLAKGVTKTKTRLVAEKINKNERKGSSEIHMEYMGEESSGFWELLGTQPSAPIGEIVSED FEPAEPRLYKVGLGMGYLELPQVEIPKKRLVHSLLDTKNVYILDCKSDLYVWIGKKSTRLVRAAALKLSQELNFMIDRPP CCSVTRCLQGTEPQIFKTKFIGWDDVLAVDFTRTAESVSRRGADLKVIMERDKMKTDLSALFMPRQPAMPFDEAEQVMQD WNDDMDGMEAFVLEDKKFVRLPDDELGIFHTHDCYVFLCRYWVPVDEPEDEDLDDDEEPPEEDTKCVVYFWQGRMASNMG WLTFTFSLQKKFESLFGDKLEVVRTHQQQENLKFLSHFKREFVIRDGKRKTPSAPAVKPSIEFFHLRANGGPIATRCIQI QPNASLLNSCFCYILMVPFDSEDLRGVVYVWIGKKAEHQEAELAEKIAYKMYPDNYTVQMINEGEEPENFFWVGIGGRKP YDSDATYMKFARLFRCSNEKGYFTVSEKCADFCQDDLADDDVMLLDNGEQVFLWVGRKTSDVEIKLAFKSAQVYIQHLRN KQPDRPRKLLLAMKYKENRRFTKCFHGWGKYKEVLQ |
|