Gene
| Gene Model ID | pfu_aug2.0_209.1_30433 |
|---|---|
| Locus | scaffold209.1 : 339808 ... 350875 : - |
| To GenomeBrowser | scaffold209.1:339808..350875 |
| Genes list of scaffold | scaffold209.1 |
| Synonym | pfu_aug1.0_3370.1_59211 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_209.1_30433.t1 | 2 | 1 | VEFS-Box | 200 | 225 | 0.0 | 171.2 | 0.24 | 3600.0 | -2.5 |
| pfu_aug2.0_209.1_30433.t1 | 2 | 2 | VEFS-Box | 467 | 600 | 0.0 | 171.2 | 0.0 | 0.0 | 169.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_209.1_30433.t1 | gi|676428597|ref|XP_009045327.1| | hypothetical protein LOTGIDRAFT_71464, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_209.1_30433.t1 | gi|585690881|ref|XP_006821150.1| | PREDICTED: polycomb protein suz12-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_209.1_30433.t1 | gi|524891115|ref|XP_005102094.1| | PREDICTED: polycomb protein suz12-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_209.1_30433.t1 | gi|524891117|ref|XP_005102095.1| | PREDICTED: polycomb protein suz12-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_209.1_30433.t1 | gi|632942767|ref|XP_007886605.1| | PREDICTED: polycomb protein SUZ12 isoform X1 [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_209.1_30433.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_209.1_30433.t1 atgagacccaagaagaaggacagatcacagaaaaccaagaacgagaccttaagtgagacagatagctcagaccgggaaca gttcctccaagcgtttgaaagtaattacccattcactttatatggatcacccatattcctgcctcgaacacttagcttta tgaagaagagacggagtgttcacaccagcaataagaaaaggaaagcatttgacattgactccattctatcaacattacaa gcaaagcttaatgattctcaagaatcccagaagtccagacctcagtgcatgagtttgaagtttggaggtgtattttctga ccaccaagacatcaatgttgatacagtagaagtggatgtgtcattgatcaaagtgtgtcatgccaaaagaaaagacatgg ttgtccctgtgtcgaaagcagccttagggaaattccaagtgccaatcaacccccaaccagattctacaaagacaggggaa agtttagttgtgcctcatggacatttttgtcatgtgaatggaaccactgtgaaatcatttagcttagtacttagtgtaag atatccattgaatggctccccaatgcctaacggatattgtaatggtgatgtagattcagaagcagaggaacctcctcaca agaggcggcggaacggtcagatcactcagctggaggagaaggatttcatccattacagtaccgaactagtcatatacgat agatatggacagtgtcaactgacagacggagattataaactcatactgtacgagcagggaaacaaatcaaatgcatcgtg ggagtctgtcatggaaggaaagccggtggggtcgtttgagatattcaactactacccgacgttacacatgacactgtgtt ggagggatgaagtcaaacaggaaccagacttcaattcagggatctcaactgctcaccatgaattcctcaataataatcaa tattccagccattttatgtctgcatttagctcagggaacaataataaagagaacaatcaactcactccaaagaaaaggca gcgtatattctatcaattcttatacaacaacaatgccaagcagcaaacagaagccagggatgacatgcactgtccatggt gctttatcaactgtatggaaccgtatagcttattcaaacacttacgacttagtcatgggagatttaattttatttatgtg cctcacccaaagggataccgagtggatgtctcaataaacgagcgatatgacggatcttatgcaggaaatcctcaggacct acacagtcacataggttatgccttcagtcgccgtgggccagttagacgcacaccagtcactcacatcctagtgtatcgcc caaaaaggccagaatccagcttaagtgaatttatggaacaagaaaatgacatgcagacaaataaacagtttgtccagggt cacaataggttatattatcactcgttgacttgtgagcccatgaaacctcaggatgttgatgtagacagtgaagatgaaaa tgacccagcttggctgcggaagaagtctgttcagatgatagatgagtttacagatgtgaatgaaggagaaaaggaattga tgaagttatggaaccttctcatcatgaaatacaattatattgcagactgccagattccagaggcttgccaaaaatttgtt gaggaacatggccaagaattaatatgcaagaacctttaccgtaacttcattgtacacttgataaatttatttgacttcag tcttatacgcccagatttagttcatcggactgttagtatgttagacgacttgaaagaagaaattggagtttcgtag |
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Protein
| Protein ID | pfu_aug2.0_209.1_30433.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_209.1_30433.t1 MRPKKKDRSQKTKNETLSETDSSDREQFLQAFESNYPFTLYGSPIFLPRTLSFMKKRRSVHTSNKKRKAFDIDSILSTLQ AKLNDSQESQKSRPQCMSLKFGGVFSDHQDINVDTVEVDVSLIKVCHAKRKDMVVPVSKAALGKFQVPINPQPDSTKTGE SLVVPHGHFCHVNGTTVKSFSLVLSVRYPLNGSPMPNGYCNGDVDSEAEEPPHKRRRNGQITQLEEKDFIHYSTELVIYD RYGQCQLTDGDYKLILYEQGNKSNASWESVMEGKPVGSFEIFNYYPTLHMTLCWRDEVKQEPDFNSGISTAHHEFLNNNQ YSSHFMSAFSSGNNNKENNQLTPKKRQRIFYQFLYNNNAKQQTEARDDMHCPWCFINCMEPYSLFKHLRLSHGRFNFIYV PHPKGYRVDVSINERYDGSYAGNPQDLHSHIGYAFSRRGPVRRTPVTHILVYRPKRPESSLSEFMEQENDMQTNKQFVQG HNRLYYHSLTCEPMKPQDVDVDSEDENDPAWLRKKSVQMIDEFTDVNEGEKELMKLWNLLIMKYNYIADCQIPEACQKFV EEHGQELICKNLYRNFIVHLINLFDFSLIRPDLVHRTVSMLDDLKEEIGVS |
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