Gene
| Gene Model ID | pfu_aug2.0_2095.1_18680 |
|---|---|
| Locus | scaffold2095.1 : 736 ... 3480 : + |
| To GenomeBrowser | scaffold2095.1:736..3480 |
| Genes list of scaffold | scaffold2095.1 |
| Synonym | pfu_aug1.0_9606.1_02763 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2095.1_18680.t1 | 8 | 1 | zf-C2H2 | 2 | 20 | 3.4e-08 | 33.3 | 3.0e-05 | 0.09 | 13.1 |
| pfu_aug2.0_2095.1_18680.t1 | 8 | 1 | zf-met | 4 | 19 | 5.0e-06 | 26.5 | 0.017 | 52.0 | 4.2 |
| pfu_aug2.0_2095.1_18680.t1 | 8 | 2 | zf-C2H2 | 34 | 54 | 3.4e-08 | 33.3 | 0.0045 | 13.0 | 6.3 |
| pfu_aug2.0_2095.1_18680.t1 | 8 | 2 | zf-met | 34 | 44 | 5.0e-06 | 26.5 | 1.2 | 3500.0 | -1.6 |
| pfu_aug2.0_2095.1_18680.t1 | 8 | 3 | zf-met | 68 | 87 | 5.0e-06 | 26.5 | 3.5e-05 | 0.1 | 12.8 |
| pfu_aug2.0_2095.1_18680.t1 | 8 | 3 | zf-C2H2 | 69 | 88 | 3.4e-08 | 33.3 | 0.00025 | 0.74 | 10.2 |
| pfu_aug2.0_2095.1_18680.t1 | 8 | 4 | zf-C2H2 | 102 | 124 | 3.4e-08 | 33.3 | 1.2e-05 | 0.036 | 14.4 |
| pfu_aug2.0_2095.1_18680.t1 | 8 | 4 | zf-met | 102 | 120 | 5.0e-06 | 26.5 | 0.00023 | 0.68 | 10.2 |
| pfu_aug2.0_2095.1_18680.t1 | 8 | 5 | zf-met | 156 | 169 | 5.0e-06 | 26.5 | 1.4 | 4200.0 | -1.9 |
| pfu_aug2.0_2095.1_18680.t1 | 8 | 5 | zf-C2H2 | 602 | 619 | 3.4e-08 | 33.3 | 0.043 | 130.0 | 3.2 |
| pfu_aug2.0_2095.1_18680.t1 | 8 | 6 | zf-C2H2 | 632 | 650 | 3.4e-08 | 33.3 | 0.0023 | 6.7 | 7.2 |
| pfu_aug2.0_2095.1_18680.t1 | 8 | 6 | zf-met | 632 | 650 | 5.0e-06 | 26.5 | 0.00068 | 2.0 | 8.7 |
| pfu_aug2.0_2095.1_18680.t1 | 8 | 7 | zf-C2H2 | 663 | 682 | 3.4e-08 | 33.3 | 1.7e-05 | 0.05 | 13.9 |
| pfu_aug2.0_2095.1_18680.t1 | 8 | 7 | zf-met | 663 | 684 | 5.0e-06 | 26.5 | 4.8e-05 | 0.14 | 12.3 |
| pfu_aug2.0_2095.1_18680.t1 | 8 | 8 | zf-C2H2 | 686 | 694 | 3.4e-08 | 33.3 | 1.6 | 4800.0 | -1.7 |
| pfu_aug2.0_2095.1_18680.t1 | 8 | 8 | zf-met | 686 | 693 | 5.0e-06 | 26.5 | 0.68 | 2000.0 | -0.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2095.1_18680.t1 | gi|260810111|ref|XP_002599847.1| | hypothetical protein BRAFLDRAFT_230189 [Branchiostoma floridae] | 5.0e-36 |
| pfu_aug2.0_2095.1_18680.t1 | gi|512901270|ref|XP_004925094.1| | 3.0e-26 | |
| pfu_aug2.0_2095.1_18680.t1 | gi|260825078|ref|XP_002607494.1| | hypothetical protein BRAFLDRAFT_205079 [Branchiostoma floridae] | 2.0e-24 |
| pfu_aug2.0_2095.1_18680.t1 | gi|213511708|ref|NP_001134852.1| | TsetseEP [Salmo salar] | 4.0e-21 |
| pfu_aug2.0_2095.1_18680.t1 | gi|156383880|ref|XP_001633060.1| | predicted protein [Nematostella vectensis] | 7.0e-20 |
Transcript
| Transcript ID | pfu_aug2.0_2095.1_18680.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2095.1_18680.t1 atgtgtttagaatgcaggaaatcattcgtatcatcggatgccttgcttcagcatatgattgcattgaatcacgatcaaga tgtgaaggaacctacagattttcaatgcttattttgccgaaagtatttcaaggaggcatggcacgtagagtttcatggga agttgactggatgtaccagaaacaaaagcttatttttgagttgggtctgttttgtatgtaacaggaaattcaaagacata gcatcgttgaacatacatattacacatacaaatcaccagcaaataagctatacaaagacaaatttcaattgtgaaatatg tgataaatattttttacggcaatgggacctagacttccatgtgaagaggcatcattggatgcagattactgacacaagtt tcctgttgcaaaatcaaattcgagtttgtaacaacgaaatggagaataatggcaccaagattgtggaatgtataagtaac acaaacattaagcaacacgaagatagttacacaagcatgggacagagtgaagaatgtaacacaaacatagaggatgatga agaatgtaacaaagatgtaaaacaaagtgaagaatgtaacacaaacgtgaaacaaagtgaaggatgtaacacgaacgtga accaaattaaagaatgcaacacaaatgtgaaacaaagtgaagaatgttacacaaacatgaaccaacgtgaaggatataat acaaacaacgtgaaacaatgtgaagaatgtaccttagataatgagcatgatgaagaatgtaatacatacatcggacacag tgaagaatgtaacacaagcatggaaaacgacgaagaaggtaacataaacatggagaacaataaagaatgtaacactaata gggagtggagtgtagatgaacaatgtaatattgacataaaagaagaatgtaacagcagtatagagacatatcagcaaaat gataagaatatgacaccagagaaagaatgcgacacagatagaaaggaagagaatgaatgtaacatcaacttaatacaaga tgaacaatgtattacatacatagagcaagatgagcaaagttcatgtaacatcagtagaaaggaagaggaccaatgtaaca tcaacatagagcaagatgagcaatgtattacaaacatagatgaagatgagcaatgtattacaaacatagatgaagatgag caatctattacaaacatagatcaagatgagcaatctattacaaacatagagcaagatgagcaatgtattacaaacataga gcaagatgaacaatgttttgcaaacatagagcaagatacacaatgtattacaaacatagagcaagatgagcaatgtatta caaacatagagcaagatgaacaatgttttgcaaacatagagcaagatacacaatgtattacaaacatagagcaagataca caatgtattacaaacatagagcaagatgagcaatgtattacaaacatagagcaagatgagcaatgtattacaaacataga tcaagatgagcaatgtattacaaacatagagcaagatacacaatgtattacaaacatagagcaagatacacaatgtatta caaacatagagcaagatacacaatgtattacaaacatagagcaagatacacaatgtattacaaacatagagcaagatgag caatgtattacaaatatagagcaagatacacaatgtatttcaaacatagagcaagatgagcaatgtacatgttacatcga caatgaggttgaagatagcaatttttacccaaggccctgtattatatgttatgaagttttcaattcttctaatctatttt acaagcatgttcataaatcgtcacatgagcaaatcactattagaaaaacacctttcaaatgtgtcgtctgtcaaacattc tttatctccaagaacgacttactgcaccatgatgcatcgtgtgaaaaacctggtagtcaggagaaatatagatgtaaagt ttgtagaaagacttttcccactgcaaaattattcaatctccatacggctagtccttttgaatgtgggacttgtaactata caaattgtaatagaaacaaagtatactcgcactgtgctttggctggtcacgattatgccgtaactaaatatatgcaaatc ggaaagctgaatgacgttgacagagaagaaaagaatggacggagacatagaggaaaggaacttggacggaaaaaaagaga aaaggaaattgaacggagacaaaaagaaaaggaagttggacggaaacaaagagaaagggaaatcaaacggaagcaaagag aaaaggagattgaacggaaacaaaaagaaaaggaagttgggcggaaacaaagagaaaagaaaattgaacggaaacaaaga gaaaagaaaactgaacggaaacaaagagaaaagaaaactgaacggaaacaaagagaaaagaaaactgaacggaaacaaag agaaaagaaacgtgaggaaaatcaaagcgaagatgctgatggtgaacagcctgttgcaggagatttgatcatggaagtgg aagagtgcaagactgcacattctgatgaagacgttaatgtttgcaacgagaagcaaaataataatganttgtattacaaa catagagcaagatga |
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Protein
| Protein ID | pfu_aug2.0_2095.1_18680.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2095.1_18680.t1 MCLECRKSFVSSDALLQHMIALNHDQDVKEPTDFQCLFCRKYFKEAWHVEFHGKLTGCTRNKSLFLSWVCFVCNRKFKDI ASLNIHITHTNHQQISYTKTNFNCEICDKYFLRQWDLDFHVKRHHWMQITDTSFLLQNQIRVCNNEMENNGTKIVECISN TNIKQHEDSYTSMGQSEECNTNIEDDEECNKDVKQSEECNTNVKQSEGCNTNVNQIKECNTNVKQSEECYTNMNQREGYN TNNVKQCEECTLDNEHDEECNTYIGHSEECNTSMENDEEGNINMENNKECNTNREWSVDEQCNIDIKEECNSSIETYQQN DKNMTPEKECDTDRKEENECNINLIQDEQCITYIEQDEQSSCNISRKEEDQCNINIEQDEQCITNIDEDEQCITNIDEDE QSITNIDQDEQSITNIEQDEQCITNIEQDEQCFANIEQDTQCITNIEQDEQCITNIEQDEQCFANIEQDTQCITNIEQDT QCITNIEQDEQCITNIEQDEQCITNIDQDEQCITNIEQDTQCITNIEQDTQCITNIEQDTQCITNIEQDTQCITNIEQDE QCITNIEQDTQCISNIEQDEQCTCYIDNEVEDSNFYPRPCIICYEVFNSSNLFYKHVHKSSHEQITIRKTPFKCVVCQTF FISKNDLLHHDASCEKPGSQEKYRCKVCRKTFPTAKLFNLHTASPFECGTCNYTNCNRNKVYSHCALAGHDYAVTKYMQI GKLNDVDREEKNGRRHRGKELGRKKREKEIERRQKEKEVGRKQREREIKRKQREKEIERKQKEKEVGRKQREKKIERKQR EKKTERKQREKKTERKQREKKTERKQREKKREENQSEDADGEQPVAGDLIMEVEECKTAHSDEDVNVCNEKQNNNXLYYK HRAR |
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