Gene
| Gene Model ID | pfu_aug2.0_2095.1_18681 |
|---|---|
| Locus | scaffold2095.1 : 4086 ... 5691 : + |
| To GenomeBrowser | scaffold2095.1:4086..5691 |
| Genes list of scaffold | scaffold2095.1 |
| Synonym | pfu_aug1.0_9606.1_02763 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2095.1_18681.t1 | 4 | 1 | zf-C2H2_2 | 171 | 216 | 6.1e-06 | 26.2 | 0.012 | 18.0 | 5.4 |
| pfu_aug2.0_2095.1_18681.t1 | 5 | 1 | zf-C2H2 | 174 | 194 | 8.3e-09 | 35.2 | 1.1e-05 | 0.016 | 15.5 |
| pfu_aug2.0_2095.1_18681.t1 | 5 | 2 | zf-C2H2 | 207 | 225 | 8.3e-09 | 35.2 | 0.00025 | 0.37 | 11.2 |
| pfu_aug2.0_2095.1_18681.t1 | 4 | 2 | zf-C2H2_2 | 247 | 280 | 6.1e-06 | 26.2 | 2.6e-06 | 0.0039 | 17.2 |
| pfu_aug2.0_2095.1_18681.t1 | 5 | 3 | zf-C2H2 | 249 | 269 | 8.3e-09 | 35.2 | 0.0011 | 1.6 | 9.2 |
| pfu_aug2.0_2095.1_18681.t1 | 4 | 3 | zf-C2H2_2 | 281 | 307 | 6.1e-06 | 26.2 | 0.011 | 16.0 | 5.7 |
| pfu_aug2.0_2095.1_18681.t1 | 5 | 4 | zf-C2H2 | 282 | 303 | 8.3e-09 | 35.2 | 0.00032 | 0.47 | 10.8 |
| pfu_aug2.0_2095.1_18681.t1 | 4 | 4 | zf-C2H2_2 | 324 | 339 | 6.1e-06 | 26.2 | 0.17 | 240.0 | 1.8 |
| pfu_aug2.0_2095.1_18681.t1 | 5 | 5 | zf-C2H2 | 326 | 340 | 8.3e-09 | 35.2 | 0.12 | 170.0 | 2.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2095.1_18681.t1 | gi|71651879|ref|XP_814607.1| | hypothetical protein [Trypanosoma cruzi strain CL Brener] | 7.0e-09 |
| pfu_aug2.0_2095.1_18681.t1 | gi|71407917|ref|XP_806395.1| | kinetoplast DNA-associated protein [Trypanosoma cruzi strain CL Brener] | 2.0e-08 |
Transcript
| Transcript ID | pfu_aug2.0_2095.1_18681.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2095.1_18681.t1 atgcaaatcggaaagctgaatgacgttgacagagaagaaaagaatggacggagacatagaggaaaggaacttggacggaa aaaaagagaaaaggaaattgaacggagacaaaaagaaaaggaagttggacggaaacaaagagaaagggaaatcaaacgga agcaaagagaaaaggagattgaacggaaacaaaaagaaaaggaagttgggcggaaacaaagagaaaagaaaattgaacgg aaacaaagagaaaagaaaactgaacggaaacaaagagaaaagaaaactgaacggaaacaaggagaaaagaaaactgaacg gaaacaaagagaaaagaaaactgaacggaaacaaagagaaaagaaacgtgaggaaaatcaaagcgaagatgctgatggtg aacagcctgttgcaggagatttgatcatggaagtggaagagtgcaagactgcacattctgatgaagacgttaatgtttgc aacgagaagcaaaataataatgataataacgaaggaataatgtgcagagtttgtaggaaatttttttcacgcacaggata ctttagaaagcacataaaattcatgaagcacgagcagaaaagcttacaacagacagaatttgtatgcaggaaatgtcatc agtttttcgtcagttcatgggatttgaagatgcatgaatattttgaattcgacggaggagattgtcgaaaggatccgatc gataaacaaccggaagttcccttaatttgtgttcaatgtgaaacgccgtacaaaaaaatgaatgctctgcggaaacacat cgttagcacaaaacacgagcagatcagtcctaaagaaacggactttaaatgtttcatgtgtggaaaattctttgttggag attgggacttgacttttcatatgatagaaagaggacacttgggtgacgggcgcccatctgtgagagggaagccactggat agaaggaaaaacgaaagatgtgttacatgtaagatggaatttgaatctttagaaatgttaggagtcatatag |
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Protein
| Protein ID | pfu_aug2.0_2095.1_18681.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2095.1_18681.t1 MQIGKLNDVDREEKNGRRHRGKELGRKKREKEIERRQKEKEVGRKQREREIKRKQREKEIERKQKEKEVGRKQREKKIER KQREKKTERKQREKKTERKQGEKKTERKQREKKTERKQREKKREENQSEDADGEQPVAGDLIMEVEECKTAHSDEDVNVC NEKQNNNDNNEGIMCRVCRKFFSRTGYFRKHIKFMKHEQKSLQQTEFVCRKCHQFFVSSWDLKMHEYFEFDGGDCRKDPI DKQPEVPLICVQCETPYKKMNALRKHIVSTKHEQISPKETDFKCFMCGKFFVGDWDLTFHMIERGHLGDGRPSVRGKPLD RRKNERCVTCKMEFESLEMLGVI |
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