Gene
| Gene Model ID | pfu_aug2.0_2095.1_18686 |
|---|---|
| Locus | scaffold2095.1 : 71458 ... 102625 : - |
| To GenomeBrowser | scaffold2095.1:71458..102625 |
| Genes list of scaffold | scaffold2095.1 |
| Synonym | pfu_aug1.0_2478.1_15832 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2095.1_18686.t1 | 7 | 1 | EGF_CA | 429 | 438 | 2.3e-16 | 59.4 | 1.5 | 3200.0 | -1.8 |
| pfu_aug2.0_2095.1_18686.t1 | 7 | 2 | EGF_CA | 805 | 842 | 2.3e-16 | 59.4 | 0.0014 | 3.0 | 7.9 |
| pfu_aug2.0_2095.1_18686.t1 | 6 | 1 | FXa_inhibition | 807 | 842 | 1.5e-23 | 82.6 | 1.8e-13 | 3.9e-10 | 39.6 |
| pfu_aug2.0_2095.1_18686.t1 | 6 | 1 | EGF | 807 | 835 | 8.3e-07 | 28.8 | 0.00012 | 0.26 | 11.2 |
| pfu_aug2.0_2095.1_18686.t1 | 4 | 1 | cEGF | 827 | 847 | 5.2e-14 | 51.5 | 2.4e-06 | 0.005 | 16.4 |
| pfu_aug2.0_2095.1_18686.t1 | 6 | 2 | EGF | 842 | 873 | 8.3e-07 | 28.8 | 0.012 | 26.0 | 4.8 |
| pfu_aug2.0_2095.1_18686.t1 | 7 | 3 | EGF_CA | 844 | 883 | 2.3e-16 | 59.4 | 1.4e-06 | 0.003 | 17.5 |
| pfu_aug2.0_2095.1_18686.t1 | 6 | 2 | FXa_inhibition | 853 | 876 | 1.5e-23 | 82.6 | 0.00018 | 0.38 | 10.8 |
| pfu_aug2.0_2095.1_18686.t1 | 4 | 2 | cEGF | 865 | 888 | 5.2e-14 | 51.5 | 5.4e-07 | 0.0011 | 18.5 |
| pfu_aug2.0_2095.1_18686.t1 | 7 | 4 | EGF_CA | 885 | 910 | 2.3e-16 | 59.4 | 2.2e-08 | 4.6e-05 | 23.3 |
| pfu_aug2.0_2095.1_18686.t1 | 6 | 3 | EGF | 889 | 909 | 8.3e-07 | 28.8 | 7.7e-05 | 0.16 | 11.9 |
| pfu_aug2.0_2095.1_18686.t1 | 6 | 3 | FXa_inhibition | 893 | 910 | 1.5e-23 | 82.6 | 0.0087 | 18.0 | 5.5 |
| pfu_aug2.0_2095.1_18686.t1 | 7 | 5 | EGF_CA | 926 | 951 | 2.3e-16 | 59.4 | 2.1e-08 | 4.3e-05 | 23.3 |
| pfu_aug2.0_2095.1_18686.t1 | 6 | 4 | EGF | 930 | 950 | 8.3e-07 | 28.8 | 7.7e-05 | 0.16 | 11.9 |
| pfu_aug2.0_2095.1_18686.t1 | 6 | 4 | FXa_inhibition | 934 | 951 | 1.5e-23 | 82.6 | 0.0087 | 18.0 | 5.5 |
| pfu_aug2.0_2095.1_18686.t1 | 6 | 5 | FXa_inhibition | 1155 | 1190 | 1.5e-23 | 82.6 | 1.5e-11 | 3.1e-08 | 33.6 |
| pfu_aug2.0_2095.1_18686.t1 | 7 | 6 | EGF_CA | 1155 | 1182 | 2.3e-16 | 59.4 | 0.13 | 270.0 | 1.6 |
| pfu_aug2.0_2095.1_18686.t1 | 6 | 5 | EGF | 1155 | 1181 | 8.3e-07 | 28.8 | 0.043 | 91.0 | 3.1 |
| pfu_aug2.0_2095.1_18686.t1 | 4 | 3 | cEGF | 1175 | 1195 | 5.2e-14 | 51.5 | 2.2e-05 | 0.046 | 13.3 |
| pfu_aug2.0_2095.1_18686.t1 | 7 | 7 | EGF_CA | 1192 | 1225 | 2.3e-16 | 59.4 | 1.2e-07 | 0.00026 | 20.8 |
| pfu_aug2.0_2095.1_18686.t1 | 6 | 6 | EGF | 1196 | 1221 | 8.3e-07 | 28.8 | 2.3e-06 | 0.0049 | 16.7 |
| pfu_aug2.0_2095.1_18686.t1 | 6 | 6 | FXa_inhibition | 1201 | 1225 | 1.5e-23 | 82.6 | 1.0e-06 | 0.0022 | 18.0 |
| pfu_aug2.0_2095.1_18686.t1 | 4 | 4 | cEGF | 1212 | 1234 | 5.2e-14 | 51.5 | 2.5e-07 | 0.00052 | 19.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2095.1_18686.t1 | gi|632935059|ref|XP_007887607.1| | PREDICTED: latent-transforming growth factor beta-binding protein 2-like [Callorhinchus milii] | 6.0e-29 |
Transcript
| Transcript ID | pfu_aug2.0_2095.1_18686.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2095.1_18686.t1 atgcttcagattttgagggttagattaaattttaagaaaaacaatcttgccttagaaacggttgacatcggtcagtcccc atcaccactgtcctacaagtatgacaaggaggatgagtccacgctccagaccgccttcctgctccaccagacccccgttc ccacggcacactacctgttatacgtggacgtctacatacacgaggatcacggtgtacagtactcgggccacattttgatg tgggaacaggtggacactacagatagttatgttctgaagtataaggaggctatacagttcagtatgactcagggtgtaca aaggtattttgtctccaccccatattccgtgacgagggaaaacacattcgttggttggagctttgaccaagaaagtggac caatcagcttcacgtattcaccggatccaggaaccggtctattattcttgggttttacttccggtgattccaaccaatta caaatcggacagacatacactccgtactataaacccatgatatttgctttccaggcggcattcgtattttccccatcgtt gatatcaacaactaccactagtactattacaacgcagacgacgacaacccaagaacagacaacacagcaacctccgccaa atttcaacctaccacgtgacggtacatacggttaccctgccgttcttagatccagttattatcaagacaccggaaataga cagacagcttggatcatgcgcactgtaccacttccgcaagatagctgccttataagagttaggatttatattcaccagac cttcactacggacttaaaaggctatcttctcctatgggaaacggatacatcaaatgtcaacggactcccatatacactgt tatataaacaggccctgacatacagtcaaacccagggagagcaacagatcgacttttattaccctttgcgtcttccacac ggttgttactttgggtggagctttaatcaggctgtaggaccaatcagcttccagccttccgttgaccctagcaacggaac tcacgtgatcattttggacggcactgatttggtgcaggggaattcatatgactctgtgacaaatgaaccatattttttct ctgtgcaagtggacgtttcatcgtcatggccttatccgggcataccaggacaaaaaggggcgagtggtaatgttggttcg gtaggcgacgacggcgaaagtggcgacaaaggtcagaaaggaggggatctccaacaacaccaggttgcaacacccacaac acaaccccaaaacacccaatgcaaaaacacaaagcagacaagcacagaaagagacgcgttagggacaaggaacgtcaacg cacaacacagaaacatcaaacacaaaagactacacataaaccaacgagaccaatgtgcaaccggtgccgacttaggacgg ccatctgccacggaaatagcagaaggtccaatgggatcaatcgaatctggctttttccttctgggtgactatgataaccc tggcatatatcagcttgactttgctacccaggaaatgaacctcctccccattacggctaacccgtcatcagtgacgtatg atgacgtcacacagcgggtgtactgggtggatatagatggcacaacaaatgttaaaagcgcctttcttaatggatctgac actgtaactgtagcagcaggaaattcaacctctcagtttgagggacttggcattgacgttcaaagcagatacctctttta catcgataatgggaataagataatagtgagagtgtccctagacaccttccagtccaacactattgcatcagcattcgcgt ctgctaacgcacgcccttatgacttggcagtggatattatccgaagattaatttactggaccacaacctcagtacccagt atggtagaacgatctgaatacgatggttcaaatcgccagttagtaataacgttaaccttaccaactactcataaagtggc acttgattctacaggtaacacacaagctactcaaggaagcaatgttttcgtgaatgatcctgtatctggtatactgaaga taagaatcaatgacagcttgtcaactgtgataactccaccaacatttacatacaaagatgtgttctcacttggagatgat gtatattttactacttggggactaagcgatgtgacgtcatccgttgtacgtcgattcttgatcacaagaaattacggtgg gtgtgtaaatgataagggatggatcctggtttctgacgggcggaaccaaatcttctcttgtaatgttgatgatgtcacaa ctaccaccgtctatcacagcagtctagacatcgagcagaattttaattccttttcaacagccgattttcttgctatattt gttgaaagagagaatgattgtgctgtgaacaacggaggctgtagtcacacgtgccataacatggtaggaggtcggttctg tacctgtaatgacggattttcgttagatactaatggtctaacctgtagcgacaccaatgagtgtagcatgtatcgtccat gccaacagaactgtaccaaccgacagcctgggtttgaatgtagttgttatacgggcttcgtaagaaaccaaactgatccg gccatgtgtatagacatcgacgagtgtgacacacagccgtgttcgaatgtacaacagtgtataaacacacctggttctta tatgtgtgctggagcaggggtattcatcaacacattaccaaatcttagcgacggggacatcgacgagtgtgacacacagc cgtgttcgaatgtacaacagtgtataaacacacctggttcttatatgtgtgctggagcaggggtattcatcaacacatta ccaaatcttagcgacggggactgggatctggttttcaaggccacaactggtgccgattttggtgcctttaatttgtacgt tggaagtaatacgctcaatgaagataacgacttggcaaaggctctaaacaatacactactggagcattacaaatcccaaa tggtgaacgattggagtaaccaaaatataaccaaggttaaggtcagtgtttacgacaacggtacagaagaggcttacttc atatttaatggtacgggatccgatagatacagctggtttacgcccactaagctgttatccacatcctatgacatcacaga gatccaagccaatcccagtataccgtttactattttagggatgaccaatcgtaaatttctgatctacaagaacatattat tcaactgtggcgtggagctgggttggttgttggtgtctgatgggcagctaacgacgctcccatgtactgtggacaacgtg aataccacgacagtgttctatagtaacacatctacggctcaaacaacagatgaattggacacagccgatttcttagcaat atttgtggaaatacaaaagaattgttccctgaacaatggagattgtgatcaaatctgtcaagatacaaatggaggccgtg tgtgttcgtgttactatggctacagactggtttccaatggttacggatgtgacgacgtcgatgagtgttcgattttctct ccttgtcaacatcagtgtgtgaatgaggcttcgggatatagatgtgtttgtaaccagggtttctatgtggatccttccaa cccgaataattgcacagacattgcaccacccaatattccattgccgctgagaggaggtgaggaccacataaaaattaaac ggaaaattcagcaagataaagatgcgaatctcaaatctttgtatgacgtcagattgactttgctctgcatcactggaacg tttatactcgctctacttatacttatcatagtactgagtagaatgagtagcagacgacaactcaggttaaggactgctct agccggaattcaccgcgaaaatgtagaccgtcacactgagcgactttaa |
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Protein
| Protein ID | pfu_aug2.0_2095.1_18686.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2095.1_18686.t1 MLQILRVRLNFKKNNLALETVDIGQSPSPLSYKYDKEDESTLQTAFLLHQTPVPTAHYLLYVDVYIHEDHGVQYSGHILM WEQVDTTDSYVLKYKEAIQFSMTQGVQRYFVSTPYSVTRENTFVGWSFDQESGPISFTYSPDPGTGLLFLGFTSGDSNQL QIGQTYTPYYKPMIFAFQAAFVFSPSLISTTTTSTITTQTTTTQEQTTQQPPPNFNLPRDGTYGYPAVLRSSYYQDTGNR QTAWIMRTVPLPQDSCLIRVRIYIHQTFTTDLKGYLLLWETDTSNVNGLPYTLLYKQALTYSQTQGEQQIDFYYPLRLPH GCYFGWSFNQAVGPISFQPSVDPSNGTHVIILDGTDLVQGNSYDSVTNEPYFFSVQVDVSSSWPYPGIPGQKGASGNVGS VGDDGESGDKGQKGGDLQQHQVATPTTQPQNTQCKNTKQTSTERDALGTRNVNAQHRNIKHKRLHINQRDQCATGADLGR PSATEIAEGPMGSIESGFFLLGDYDNPGIYQLDFATQEMNLLPITANPSSVTYDDVTQRVYWVDIDGTTNVKSAFLNGSD TVTVAAGNSTSQFEGLGIDVQSRYLFYIDNGNKIIVRVSLDTFQSNTIASAFASANARPYDLAVDIIRRLIYWTTTSVPS MVERSEYDGSNRQLVITLTLPTTHKVALDSTGNTQATQGSNVFVNDPVSGILKIRINDSLSTVITPPTFTYKDVFSLGDD VYFTTWGLSDVTSSVVRRFLITRNYGGCVNDKGWILVSDGRNQIFSCNVDDVTTTTVYHSSLDIEQNFNSFSTADFLAIF VERENDCAVNNGGCSHTCHNMVGGRFCTCNDGFSLDTNGLTCSDTNECSMYRPCQQNCTNRQPGFECSCYTGFVRNQTDP AMCIDIDECDTQPCSNVQQCINTPGSYMCAGAGVFINTLPNLSDGDIDECDTQPCSNVQQCINTPGSYMCAGAGVFINTL PNLSDGDWDLVFKATTGADFGAFNLYVGSNTLNEDNDLAKALNNTLLEHYKSQMVNDWSNQNITKVKVSVYDNGTEEAYF IFNGTGSDRYSWFTPTKLLSTSYDITEIQANPSIPFTILGMTNRKFLIYKNILFNCGVELGWLLVSDGQLTTLPCTVDNV NTTTVFYSNTSTAQTTDELDTADFLAIFVEIQKNCSLNNGDCDQICQDTNGGRVCSCYYGYRLVSNGYGCDDVDECSIFS PCQHQCVNEASGYRCVCNQGFYVDPSNPNNCTDIAPPNIPLPLRGGEDHIKIKRKIQQDKDANLKSLYDVRLTLLCITGT FILALLILIIVLSRMSSRRQLRLRTALAGIHRENVDRHTERL |
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