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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_21.1_03421
Locus scaffold21.1 : 67914 ... 74305 : -
To GenomeBrowser scaffold21.1:67914..74305
Genes list of scaffold scaffold21.1
Synonym pfu_aug1.0_4525.1_08924

Manual annotation
Annotation by Blast2GO
Annotation GO
transcription factor 7-like 2 isoform x7 GO:0005515 GO:0005634 GO:0006357 GO:0007399 GO:0009653 GO:0009790 GO:0009968 GO:0015031 GO:0016055 GO:0031328 GO:0032991 GO:0044711 GO:0044765 GO:0045595 GO:0048513 GO:0051649 GO:0065008 GO:2000026

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_21.1_03421.t1 gi|642917177|ref|XP_008191151.1| PREDICTED: pangolin isoform X3 [Tribolium castaneum] 3.0e-29
pfu_aug2.0_21.1_03421.t1 gi|642917173|ref|XP_008191149.1| PREDICTED: pangolin isoform X1 [Tribolium castaneum] 5.0e-29
pfu_aug2.0_21.1_03421.t1 gi|221132465|ref|XP_002159974.1| 4.0e-27
pfu_aug2.0_21.1_03421.t1 gi|585639532|ref|XP_006879986.1| PREDICTED: transcription factor 7-like 2 isoform X3 [Elephantulus edwardii] 6.0e-27
pfu_aug2.0_21.1_03421.t1 gi|634850170|ref|XP_007939757.1| PREDICTED: transcription factor 7-like 2 isoform X7 [Orycteropus afer afer] 1.0e-26

Transcript
Transcript IDpfu_aug2.0_21.1_03421.t1
Definition-
>pfu_aug2.0_21.1_03421.t1
atggccagaaaggaaaaggaacttcatatgcagctttaccccggatggagtgctagggacaattatgcaagtcatacaaa
aaagaagaggaagaaaaaggatggcacaccttccaaagattgtagtaatcccaaaaaatgtcgagctcgttatggtctag
aacaacaaaatcaatggtgcaaaccttgtaggagaaagaaaaaatgtattagatatcgggtggatgaggaagggaatgaa
tattttatagatggtgacgtagaagggctgagtgatagcttagccaccgaggactctgctcatgacagtgactctatgac
gggcagccctatgcattcagtcaccagcgacgatgccttctcaacaccatccaaatctatgtgtcataactctccatcca
tccgcacaagaaccgaatttcatgatgatattccaggacttaatgtggatgaagaacatactggtgacttagatatgacg
gtaaaaatggaagatttagagtga

Protein
Protein IDpfu_aug2.0_21.1_03421.t1
Definition-
>pfu_aug2.0_21.1_03421.t1
MARKEKELHMQLYPGWSARDNYASHTKKKRKKKDGTPSKDCSNPKKCRARYGLEQQNQWCKPCRRKKKCIRYRVDEEGNE
YFIDGDVEGLSDSLATEDSAHDSDSMTGSPMHSVTSDDAFSTPSKSMCHNSPSIRTRTEFHDDIPGLNVDEEHTGDLDMT
VKMEDLE

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