Gene
| Gene Model ID | pfu_aug2.0_21.1_03424 |
|---|---|
| Locus | scaffold21.1 : 139906 ... 155905 : + |
| To GenomeBrowser | scaffold21.1:139906..155905 |
| Genes list of scaffold | scaffold21.1 |
| Synonym | pfu_aug1.0_40033.1_12399 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_21.1_03424.t1 | 2 | 1 | NACHT | 296 | 434 | 1.3e-07 | 31.4 | 6.0e-10 | 1.5e-06 | 27.9 |
| pfu_aug2.0_21.1_03424.t1 | 2 | 2 | NACHT | 697 | 742 | 1.3e-07 | 31.4 | 0.22 | 540.0 | 0.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_21.1_03424.t1 | gi|676461876|ref|XP_009056085.1| | hypothetical protein LOTGIDRAFT_119509, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_21.1_03424.t1 | gi|524890122|ref|XP_005101610.1| | PREDICTED: uncharacterized protein LOC101851652 [Aplysia californica] | 0.0 |
| pfu_aug2.0_21.1_03424.t1 | gi|260799071|ref|XP_002594523.1| | hypothetical protein BRAFLDRAFT_124992 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_21.1_03424.t1 | gi|260799057|ref|XP_002594516.1| | hypothetical protein BRAFLDRAFT_124973 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_21.1_03424.t1 | gi|585670290|ref|XP_006817837.1| | PREDICTED: NACHT and WD repeat domain-containing protein 1-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_21.1_03424.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_21.1_03424.t1 atggcaataataggagacagatacggtttccgtcccatacccacggagatagacagagatttatacaacatgttacacag tctggctacagaacataaactacaggacaccaagttattggacacatggtacaagctggatgaaaatgctctacccccta cgtacatactacagccaatcagatcacagtttacattttatggtgaccacagtccaggttgcgaggaactcaggaataag gacacaaataattggcagcatacatttcagtcgttacaaaatattctcagggaatcagtcaagctggcctttgatagaaa atttgtaactcaggacatgctacacaatttcactttgtcagtgacagagctagagataggacatggattacttagagtga aagatccaaagacaagttgtcttgtgtttcaccgagagataagtggtgctatggactttgaaggtagattggtgcagaga cattttgactgtgccaatactaatggcaagatggaaaggaatgaagagattagaagacttcagtcagaacttaaagaaaa ggtaaaaaagaaaatgggaaacacaggaataaaagaatttaaagtaacatggagggatggaggtatcaaccctaagttac acaaagatcacgagatgtacctcgatcagttttgtaaggagctttataacggtgtcgttaatttgacagaaaacgctgta ctgaggcagcagaacaaaattagatactcagattactacagtgaatatcaggaggttctacatcatttacacttctgtca ggtcaaatgtgagactttctgtggacgggaggatgtactacagagcatcaaggggtacctcaatgatgcatccatgagga aacctctggtcctccatgcctcctcaggaggagggaaaacctcagtgatggccatggcaatgaaaagtctgaagacatgg tataaaggaaagtcttatgttggtgttgtaaggttccttgggacatctccactcagcagtaatatatatgatgtcttacg cagtgtttgtggtcagctcgcagataatgcagaccgcatgatggaaccagtaggatacaaaagtatgaagaacatcatag aatatatacgcaggcttttaaaacaaatttccacagcactgaaatgtccaatagtcatactccttgactcgcttgatcag ctatctaagacacatgatgcttactccatgtcatggttacctctgtctttaccgtcaaatgtcaagttagtagtttccac tctccccgaagaacatggaattctagatagtctcagggaacttcatccagaggaaaggttttatgttcacttgccaatcc tacctcgtcaaacagcaccttctccactgttcttgaaactgattctggaccaagccgtgacatggaactcctacagtcaa gaacacgagttagttctacaggattcagttagaggagctatcaatatgttatttgacaatctagaggcaaagtttggtag cattgtgacaagccatactttaggctactttacaatagctctaaacggaatctcagaaaatgagctggaggatgttttgt catgtgacgatgaagcactgaatgacctgtacagatatcatgatcctcctgttgagggtattgtgagatgccccccagtt attgtggcaaggattcagtatgacatcaaggagtatatcgtagagagaatgtcacatggtaaatataccaagaactggta ccacagacagtttgtggagactgctaaagcaaggtactgtacaggattagaaggagaaaaacttcatcgtaatatgtgtg agatctacatgggagagaatggtgtaaaacgcagtatcacactgaccaggaggaaactgacggtacctgatgctgacaga caagtcacgccccaacctgtagaagtggaaaataaacgcatgctgagatgtcttccatatcatattgtccatgctggaca acaactacctatgacattatcaaaagacaaatgcttctgtaacctgaagtttctttcttcgtttctgcagttatgtgatg tagaaactttactggatttctttagagaattcttggagagaaataatgatgcagaagtgacaaagcttcacagctttttg tcctcctgcaagtctgatttgagtaagcccttagagatggccatcagcttaatggcaaatatagtccctgaagaggacaa tgtttacctgaagtctctgctcagtcaagcggaaaagttcctgctgtcacagaagagacctttactgattcctgcctacc catgcatggcccataaccaggtatctgcttcttcagatttgtcaaggcatgtgacgtcacagttcgagggggctttatca aagtctgataagaatgacaaagaaggtaccaatggtttacttggagaaaatcagatagcatgcgttgatgtccatccagg tgggaaaatatttgtgactgttacttctcacggacttctgaaggaatttgacaaaatagtagcttcctggaaccagaaga atcaaccattgttatcacaggaatatccctatctgttcattgctgttgacctacagcaggctaatggtggactggtgtat tgtaaacgtgctgatacaacggtacctgttcttggtaaggatatctgtgctactgcaggaaactccatggttgtaatcac aggatataagacagtattctgggacataccaacaggtagatgtgttcggcgggtgactaagaagagggagtatggtatga tgcttatgcagagctgggtggggccagactcttgtgataatcaagtgataacccagagtcccgacggcagtgtgttggtg acgggatcagtcgggggctatgtgtttatatgggactctgtcagtggtttgcctgttggagagaaggcaccaaaatcaaa acactcctctgaggtatga |
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Protein
| Protein ID | pfu_aug2.0_21.1_03424.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_21.1_03424.t1 MAIIGDRYGFRPIPTEIDRDLYNMLHSLATEHKLQDTKLLDTWYKLDENALPPTYILQPIRSQFTFYGDHSPGCEELRNK DTNNWQHTFQSLQNILRESVKLAFDRKFVTQDMLHNFTLSVTELEIGHGLLRVKDPKTSCLVFHREISGAMDFEGRLVQR HFDCANTNGKMERNEEIRRLQSELKEKVKKKMGNTGIKEFKVTWRDGGINPKLHKDHEMYLDQFCKELYNGVVNLTENAV LRQQNKIRYSDYYSEYQEVLHHLHFCQVKCETFCGREDVLQSIKGYLNDASMRKPLVLHASSGGGKTSVMAMAMKSLKTW YKGKSYVGVVRFLGTSPLSSNIYDVLRSVCGQLADNADRMMEPVGYKSMKNIIEYIRRLLKQISTALKCPIVILLDSLDQ LSKTHDAYSMSWLPLSLPSNVKLVVSTLPEEHGILDSLRELHPEERFYVHLPILPRQTAPSPLFLKLILDQAVTWNSYSQ EHELVLQDSVRGAINMLFDNLEAKFGSIVTSHTLGYFTIALNGISENELEDVLSCDDEALNDLYRYHDPPVEGIVRCPPV IVARIQYDIKEYIVERMSHGKYTKNWYHRQFVETAKARYCTGLEGEKLHRNMCEIYMGENGVKRSITLTRRKLTVPDADR QVTPQPVEVENKRMLRCLPYHIVHAGQQLPMTLSKDKCFCNLKFLSSFLQLCDVETLLDFFREFLERNNDAEVTKLHSFL SSCKSDLSKPLEMAISLMANIVPEEDNVYLKSLLSQAEKFLLSQKRPLLIPAYPCMAHNQVSASSDLSRHVTSQFEGALS KSDKNDKEGTNGLLGENQIACVDVHPGGKIFVTVTSHGLLKEFDKIVASWNQKNQPLLSQEYPYLFIAVDLQQANGGLVY CKRADTTVPVLGKDICATAGNSMVVITGYKTVFWDIPTGRCVRRVTKKREYGMMLMQSWVGPDSCDNQVITQSPDGSVLV TGSVGGYVFIWDSVSGLPVGEKAPKSKHSSEV |
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