Gene
| Gene Model ID | pfu_aug2.0_21.1_03427 |
|---|---|
| Locus | scaffold21.1 : 186457 ... 196741 : + |
| To GenomeBrowser | scaffold21.1:186457..196741 |
| Genes list of scaffold | scaffold21.1 |
| Synonym | pfu_aug1.0_21722.1_33206 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mitochondrial dicarboxylate carrier isoform x3 | GO:0000096 GO:0005515 GO:0005634 GO:0006006 GO:0006811 GO:0031966 GO:1901576 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_21.1_03427.t1 | 2 | 1 | Mito_carr | 7 | 65 | 3.5e-08 | 33.0 | 9.4e-12 | 1.4e-07 | 31.1 |
| pfu_aug2.0_21.1_03427.t1 | 2 | 2 | Mito_carr | 92 | 94 | 3.5e-08 | 33.0 | 0.097 | 1400.0 | -1.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_21.1_03427.t1 | gi|524871394|ref|XP_005092470.1| | PREDICTED: mitochondrial dicarboxylate carrier-like [Aplysia californica] | 6.0e-38 |
| pfu_aug2.0_21.1_03427.t1 | gi|667281730|ref|XP_008574525.1| | PREDICTED: mitochondrial dicarboxylate carrier isoform X3 [Galeopterus variegatus] | 9.0e-36 |
| pfu_aug2.0_21.1_03427.t1 | gi|676428415|ref|XP_009045268.1| | hypothetical protein LOTGIDRAFT_211907 [Lottia gigantea] | 2.0e-32 |
| pfu_aug2.0_21.1_03427.t1 | gi|675859542|ref|XP_009015331.1| | hypothetical protein HELRODRAFT_184909 [Helobdella robusta] | 5.0e-32 |
| pfu_aug2.0_21.1_03427.t1 | gi|530411618|ref|XP_005257131.1| | PREDICTED: mitochondrial dicarboxylate carrier isoform X1 [Homo sapiens] | 2.0e-31 |
Transcript
| Transcript ID | pfu_aug2.0_21.1_03427.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_21.1_03427.t1 atgcagaatgatgtcaaacttcccaaagaacagagaagaaattataagcatgccatagatggaatgtatcaggtatatag gcatgaaggaatacggagttcttttggaggagctacaatggccagctccagggccgtcatggtcacagtaggacagctag caggatatgaccagataaaacaagtactgatgaaaactggatatttccaagataacgtcacaacccatctcacatgtagt acactagctagtctagctgcatgtgcaatggatatagcaaaaaatggacctttaggattctttaagacagagcagtttga gattttcttgtctcacactccacatgacactaattatgatgtcatagaacataacgtctcaccatcgttagatttgtgca caatgtggatcaactctggtgtaaaaaatcattttagtgataataaaatgagtgagaaaaataatagtcaggggattctc atccttgtgcaaaagataagctacatccacaacaaggcttgtggattgcaaatcttttacactctgatgagattccctcg tctcagtcgctaa |
|
Protein
| Protein ID | pfu_aug2.0_21.1_03427.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_21.1_03427.t1 MQNDVKLPKEQRRNYKHAIDGMYQVYRHEGIRSSFGGATMASSRAVMVTVGQLAGYDQIKQVLMKTGYFQDNVTTHLTCS TLASLAACAMDIAKNGPLGFFKTEQFEIFLSHTPHDTNYDVIEHNVSPSLDLCTMWINSGVKNHFSDNKMSEKNNSQGIL ILVQKISYIHNKACGLQIFYTLMRFPRLSR |
|