Gene
| Gene Model ID | pfu_aug2.0_21.1_03429 |
|---|---|
| Locus | scaffold21.1 : 272237 ... 293906 : - |
| To GenomeBrowser | scaffold21.1:272237..293906 |
| Genes list of scaffold | scaffold21.1 |
| Synonym | pfu_aug1.0_5132.1_67170 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein hid1 | GO:0031985 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_21.1_03429.t1 | 2 | 1 | Dymeclin | 2 | 459 | 0.0 | 610.9 | 0.0 | 0.0 | 426.2 |
| pfu_aug2.0_21.1_03429.t1 | 4 | 1 | Hid1 | 3 | 139 | 0.0 | 722.8 | 0.0 | 1.99965e-42 | 144.9 |
| pfu_aug2.0_21.1_03429.t1 | 4 | 2 | Hid1 | 143 | 460 | 0.0 | 722.8 | 0.0 | 0.0 | 364.9 |
| pfu_aug2.0_21.1_03429.t1 | 4 | 3 | Hid1 | 455 | 753 | 0.0 | 722.8 | 0.0 | 0.0 | 215.0 |
| pfu_aug2.0_21.1_03429.t1 | 2 | 2 | Dymeclin | 455 | 747 | 0.0 | 610.9 | 0.0 | 0.0 | 181.2 |
| pfu_aug2.0_21.1_03429.t1 | 4 | 4 | Hid1 | 782 | 814 | 0.0 | 722.8 | 0.15 | 760.0 | -2.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_21.1_03429.t1 | gi|524891638|ref|XP_005102352.1| | PREDICTED: protein HID1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_21.1_03429.t1 | gi|602642607|ref|XP_007428090.1| | PREDICTED: protein HID1 [Python bivittatus] | 0.0 |
| pfu_aug2.0_21.1_03429.t1 | gi|556985017|ref|XP_005998318.1| | PREDICTED: protein HID1 isoform X2 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_21.1_03429.t1 | gi|602684354|ref|XP_007454430.1| | PREDICTED: protein HID1 isoform X2 [Lipotes vexillifer] | 0.0 |
| pfu_aug2.0_21.1_03429.t1 | gi|558222714|ref|XP_006136570.1| | PREDICTED: protein HID1 [Pelodiscus sinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_21.1_03429.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_21.1_03429.t1 atgcccattgaagcaagtgatgaggcattttgggaacagttttggtcggagagtgtaacctgtgttcaggacgtttttac attgattccggcagcagaaatacgggcattacgagaagaatcaccgtcaaatttagcaacgttatgttacaaagcagtgg aaaaattagtaaatgctgcagagagtggatgtccttcacagagagaacaacaaacagttttgaactgtgtgagacttcta acgagaatcctaccgtatatctttgaggacccagactggcgtggtttcttctggtcttcactaccaggtcaaaatgaaga tgtggagaaagaaagtccacccttggctcagtccttactgaatgcattatctgacctactgttttgtccagattttactg tacaatccaatagaaagtctggaccggacctactgttttgtccagattttactgtacaatccaatagaaagtctggaccg gataatccagaagacatgggatctatagacagttgtgaatacatctgggagtcaggggttggatttgcacactccccccc acatagtgtacatcacgaccagcacaggatggagataattaagctgtttctgacatgtttctctgagaccatgtacctac cacctgttgctgatgctcatgcgtcaccaaatcagtggatacattatttcacatcaacagagaacagacatgcattgccg ctgttcacctctatgttgaacatagtgtgtgcgtacgaccctgtaggttatggagtgccgtataatcaccttatgttcac agactctcgagaggccattgttgagggggcgttacaggtgctctgtgtaacgttagagaatgaatcatcaggacagaatg tatctgtggacggaacaacagggggtactgccatggacgctcagggtgatactggtggctcagacaatctttttgtgaat tacttatcaagaatacacagagaagaggatttccacttcatcttgaagggtattacccggttgttgaacaatcctcttac acagacctatctgccgggttccacaaagaagatacagtttcaccaggaattactggttctattctggaaaatgtgtgata tcaacaagaaattcatgttctacgtactgaagagtagtgatgtattggacgtgttagtacccattctgtatttcctgaat gatgccagagctgatcagtctcgagttggcctgatgcacataggtgtttttattctgctgttgctaagtggtgagagaaa ctttggtgttcggttgaacaagccttactcagttcgcgttcccatggatatacctgtattcactggcacacatgcagatt ttctcataatagcatttagcaccccctggttcctgtatgccagccctacaaatcatcatctagtctttttcctcctggaa gtattcaacaacattatacagtatcagtttgatggtaactgtaatcttgtttacacaattatacgcaagaggaatgtgtt tcatcagttggcaaacttacctactgagcacaccactatagccaaagccatgagtaaacgagggaagaagtttgtgcagc tgaccgcgccctccgatagcaaggagccacagacaatggagggggctatccccgcggcagaggcagaaccagggacactc aaggcttcccttgcagccacaccacgtctagataagatgacagagaagtcggcccctgatgaaggtcacacagaccctac cctacaggaactagccaaatctagtggtacggttaacatccaaccaccaagtgaaatccaggaccccacagccgaggaaa atcctgctatagagagacccaaggtccaaaatgctaaaagtgtgtcgacccctccctccagtcctacgtcccccaccagc tcggagtctggtcgcttcccactgaccaggaccaattctacacagagcactgcaggatcctgggtggccacacctgaatg ggttcagtcatggaaacagaaactacccctacagacaataatgaggatgttacaggtgctggtacctcaggtggaaaaaa tatgtattgacaaggggctgacagacgagagtgagatactgaaattcctacagcatggtacactggtgggacttcttcct gtaccacatcctatactgatcagaaagtaccaagctaacagtggcaccaccatgtggttccgtacctacttatggggggt tatatatctcagagagtatgatcaatggaccaccaatctgatcacggacttacgactcggaaatccagttctcgacttta cagagacaacgtacctgttagatctctatcagggaggcacagatctaatcaaatcctttgtataccttaacatgcatact gaggacatggatgttatcagcctttttacttcctttcttggtggnctttacagagacaacgtacctgttagatctctatc agggaggcacagatctaatcaaatcctttgtataccttaa |
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Protein
| Protein ID | pfu_aug2.0_21.1_03429.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_21.1_03429.t1 MPIEASDEAFWEQFWSESVTCVQDVFTLIPAAEIRALREESPSNLATLCYKAVEKLVNAAESGCPSQREQQTVLNCVRLL TRILPYIFEDPDWRGFFWSSLPGQNEDVEKESPPLAQSLLNALSDLLFCPDFTVQSNRKSGPDLLFCPDFTVQSNRKSGP DNPEDMGSIDSCEYIWESGVGFAHSPPHSVHHDQHRMEIIKLFLTCFSETMYLPPVADAHASPNQWIHYFTSTENRHALP LFTSMLNIVCAYDPVGYGVPYNHLMFTDSREAIVEGALQVLCVTLENESSGQNVSVDGTTGGTAMDAQGDTGGSDNLFVN YLSRIHREEDFHFILKGITRLLNNPLTQTYLPGSTKKIQFHQELLVLFWKMCDINKKFMFYVLKSSDVLDVLVPILYFLN DARADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSVRVPMDIPVFTGTHADFLIIAFSTPWFLYASPTNHHLVFFLLE VFNNIIQYQFDGNCNLVYTIIRKRNVFHQLANLPTEHTTIAKAMSKRGKKFVQLTAPSDSKEPQTMEGAIPAAEAEPGTL KASLAATPRLDKMTEKSAPDEGHTDPTLQELAKSSGTVNIQPPSEIQDPTAEENPAIERPKVQNAKSVSTPPSSPTSPTS SESGRFPLTRTNSTQSTAGSWVATPEWVQSWKQKLPLQTIMRMLQVLVPQVEKICIDKGLTDESEILKFLQHGTLVGLLP VPHPILIRKYQANSGTTMWFRTYLWGVIYLREYDQWTTNLITDLRLGNPVLDFTETTYLLDLYQGGTDLIKSFVYLNMHT EDMDVISLFTSFLGXLYRDNVPVRSLSGRHRSNQILCIP |
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