Gene
| Gene Model ID | pfu_aug2.0_21.1_03434 |
|---|---|
| Locus | scaffold21.1 : 386192 ... 400798 : - |
| To GenomeBrowser | scaffold21.1:386192..400798 |
| Genes list of scaffold | scaffold21.1 |
| Synonym | pfu_aug1.0_1027.1_22408 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_21.1_03434.t1 | 2 | 1 | Glyco_hydro_18 | 2 | 199 | 0.0 | 234.5 | 0.0 | 0.0 | 197.3 |
| pfu_aug2.0_21.1_03434.t1 | 2 | 2 | Glyco_hydro_18 | 204 | 267 | 0.0 | 234.5 | 5.6e-13 | 2.8e-09 | 36.8 |
| pfu_aug2.0_21.1_03434.t1 | 4 | 1 | CBM_14 | 338 | 389 | 0.0 | 160.4 | 2.8e-15 | 1.4e-11 | 44.1 |
| pfu_aug2.0_21.1_03434.t1 | 4 | 2 | CBM_14 | 424 | 475 | 0.0 | 160.4 | 1.6e-14 | 7.8e-11 | 41.7 |
| pfu_aug2.0_21.1_03434.t1 | 4 | 3 | CBM_14 | 510 | 561 | 0.0 | 160.4 | 6.5e-15 | 3.2e-11 | 42.9 |
| pfu_aug2.0_21.1_03434.t1 | 4 | 4 | CBM_14 | 588 | 639 | 0.0 | 160.4 | 2.8e-17 | 1.4e-13 | 50.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_21.1_03434.t1 | gi|524895884|ref|XP_005104423.1| | PREDICTED: uncharacterized protein LOC101846901 [Aplysia californica] | 0.0 |
| pfu_aug2.0_21.1_03434.t1 | gi|345320466|ref|XP_001518594.2| | PREDICTED: chitotriosidase-1 [Ornithorhynchus anatinus] | 0.0 |
| pfu_aug2.0_21.1_03434.t1 | gi|676485144|ref|XP_009063566.1| | hypothetical protein LOTGIDRAFT_130303, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_21.1_03434.t1 | gi|260805434|ref|XP_002597592.1| | hypothetical protein BRAFLDRAFT_123125 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_21.1_03434.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_21.1_03434.t1 atgcctgaagatattgacccattcttgtgtactcacatcatgtattccttcggaaagcttgaaggaaataggattacaaa ctacgagtggaacgatccggatagtctctgggctgatggtctttacacacgagtaaataacctgaagaaacagaatacaa acttgaaggtcctcttagcaatgggaggctggaacgctgggagtgtagtgtactcccagatgtcttctacacccaacaac agaagggaatttattgactctgccctggagttcctgagagacaacaactttgatggacttgatatggactgggagtatcc ggcaagaaggggcggggccgccgctgattataccaactttggactgctagttcaggaacttcgtaaggcatttgacgacg agctgttgcagactggaagagatcgattactgcttactgctgccgtagctgctggaaaaaccaatattgatggagtctat aacgtacctattatggccagtaacatggactttatttgcctgatgacgtatgatttcaacggagcctggggtagtgttac tggtcacaacagtccacttgatgcttcctcggctgatgcagacaaaacatggaacatgatttgtgagatgcagaacagtg gcagcggtaccacttaccgtgatacagaggcgatggttccatattacgtagatggcacaacatgggttggctttgatgac gaaattagtattcacaacaaagtcaagaatttcattattcccaatgggtacggtggagctatggtgtgggcactaccact tgatgatttcaaagcacattgcacttcaaagaaatttcctctcatcagcaaaattagggaaatatttgatgctgaggaaa acggaggttcagtgaatccctcttctgcagccccaactgttctccctgtctcgactcttgcccccactaaagtaccaaca gcagtccctacaggtgctcctacaacgctttctcctggtgacatggaattctgtgcaggcaaacctaatggcctacaagg tgatccgaccgactgcacggcatactacaactgttgggcaggtaaaggaagaaagttgaaatgttctcagggtttactgt ggaatcagcaggtgaagtactgtgaccatgctcacagagtagtatgtactactagccaaccccagacagcggcgccccct acaactacactatcaactgcggctcccacatcgaaacgccccacaacaaatgttccaaatagagaattctgtgcagacaa acccaatggcctacaaggtgatccgaccgactgcatggcatactacaactgttgggctggtcaaggaagaaagttgaaat gttctcagggtttactgtggaatcagcaggtgaagtactgtgaccatgctcacagagtagtatgtactactagccaaccc cagacagcggcgccccctacaactacacaaccaactgcggctcccacaacaaaacgccccacgacaaatgacccaaataa agaattttgtgcaggcaaacccaatggcctacaaggtgatccgaccgactgcatggcatactacaactgttggtctggtc aaggaaaaaagttgaaatgttctcagggtttactgtggaatcagcaggtgaagtactgtgaccatgctcacagagtagta tgtactactagccaaccccagacagcggcgcctcctacaactacacaatcggttacagacgccccagtaaacgaggttga ttgcacagcacttccaaatggtttatacagctttcctggtgattgtaacaaatatatcacatgctcatatggacacagtt acgagggagcgtgtcatcctgctctttatttcaattttgctttgcagaattgtgattggccgagtaacgttagctgttaa |
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Protein
| Protein ID | pfu_aug2.0_21.1_03434.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_21.1_03434.t1 MPEDIDPFLCTHIMYSFGKLEGNRITNYEWNDPDSLWADGLYTRVNNLKKQNTNLKVLLAMGGWNAGSVVYSQMSSTPNN RREFIDSALEFLRDNNFDGLDMDWEYPARRGGAAADYTNFGLLVQELRKAFDDELLQTGRDRLLLTAAVAAGKTNIDGVY NVPIMASNMDFICLMTYDFNGAWGSVTGHNSPLDASSADADKTWNMICEMQNSGSGTTYRDTEAMVPYYVDGTTWVGFDD EISIHNKVKNFIIPNGYGGAMVWALPLDDFKAHCTSKKFPLISKIREIFDAEENGGSVNPSSAAPTVLPVSTLAPTKVPT AVPTGAPTTLSPGDMEFCAGKPNGLQGDPTDCTAYYNCWAGKGRKLKCSQGLLWNQQVKYCDHAHRVVCTTSQPQTAAPP TTTLSTAAPTSKRPTTNVPNREFCADKPNGLQGDPTDCMAYYNCWAGQGRKLKCSQGLLWNQQVKYCDHAHRVVCTTSQP QTAAPPTTTQPTAAPTTKRPTTNDPNKEFCAGKPNGLQGDPTDCMAYYNCWSGQGKKLKCSQGLLWNQQVKYCDHAHRVV CTTSQPQTAAPPTTTQSVTDAPVNEVDCTALPNGLYSFPGDCNKYITCSYGHSYEGACHPALYFNFALQNCDWPSNVSC |
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