Gene
| Gene Model ID | pfu_aug2.0_21.1_03435 |
|---|---|
| Locus | scaffold21.1 : 404863 ... 432988 : - |
| To GenomeBrowser | scaffold21.1:404863..432988 |
| Genes list of scaffold | scaffold21.1 |
| Synonym | pfu_aug1.0_58930.1_27450 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| chit protein | GO:0016798 GO:0071704 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_21.1_03435.t1 | 3 | 1 | Glyco_hydro_18 | 22 | 160 | 0.0 | 575.6 | 2.50006e-41 | 4.1e-38 | 131.7 |
| pfu_aug2.0_21.1_03435.t1 | 3 | 2 | Glyco_hydro_18 | 156 | 325 | 0.0 | 575.6 | 6.44597e-44 | 1.10001e-40 | 140.1 |
| pfu_aug2.0_21.1_03435.t1 | 6 | 1 | PT | 358 | 393 | 1.1e-11 | 43.8 | 3.1e-08 | 5.1e-05 | 22.5 |
| pfu_aug2.0_21.1_03435.t1 | 6 | 2 | PT | 375 | 409 | 1.1e-11 | 43.8 | 1.5e-10 | 2.5e-07 | 29.8 |
| pfu_aug2.0_21.1_03435.t1 | 6 | 3 | PT | 387 | 420 | 1.1e-11 | 43.8 | 4.0e-08 | 6.5e-05 | 22.1 |
| pfu_aug2.0_21.1_03435.t1 | 4 | 1 | CBM_14 | 432 | 484 | 1.7e-34 | 117.5 | 2.0e-13 | 3.4e-10 | 39.7 |
| pfu_aug2.0_21.1_03435.t1 | 6 | 4 | PT | 502 | 521 | 1.1e-11 | 43.8 | 9.0 | 15000.0 | -20.0 |
| pfu_aug2.0_21.1_03435.t1 | 4 | 2 | CBM_14 | 535 | 586 | 1.7e-34 | 117.5 | 2.7e-14 | 4.4e-11 | 42.5 |
| pfu_aug2.0_21.1_03435.t1 | 6 | 5 | PT | 599 | 607 | 1.1e-11 | 43.8 | 9.0 | 15000.0 | -5.2 |
| pfu_aug2.0_21.1_03435.t1 | 4 | 3 | CBM_14 | 628 | 668 | 1.7e-34 | 117.5 | 0.017 | 28.0 | 4.7 |
| pfu_aug2.0_21.1_03435.t1 | 3 | 3 | Glyco_hydro_18 | 647 | 977 | 0.0 | 575.6 | 0.0 | 0.0 | 315.6 |
| pfu_aug2.0_21.1_03435.t1 | 6 | 6 | PT | 1062 | 1074 | 1.1e-11 | 43.8 | 2.6 | 4300.0 | -2.9 |
| pfu_aug2.0_21.1_03435.t1 | 4 | 4 | CBM_14 | 1088 | 1139 | 1.7e-34 | 117.5 | 2.5e-16 | 4.2e-13 | 49.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_21.1_03435.t1 | gi|92110434|emb|CAI96027.1| | Chit3 protein [Crassostrea gigas] | 0.0 |
| pfu_aug2.0_21.1_03435.t1 | gi|585703845|ref|XP_006823336.1| | PREDICTED: probable chitinase 3-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_21.1_03435.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_21.1_03435.t1 atgaagtttcttctgattttacagatttcggttctctctttttgtgcagtcttgggaaagtacaagagagtatgttacta cacaaactggtcacaatacagatctgggataggaaagttctggccagaggacatcgatcctttcctatgtacccacatca tgtattcctttggaaaactggaaggaaataagataacaaatttcgaatggaacgacccggatactgattgggctgaagga ttatacactcgagttaataatctgaagaaacagaatacagatctgaaggtactcttagcaatgggaggctggaacgctgg gagtttagtgtactcccaaatgtcttctacgcccaacaacagaagagaatttattgactctgccttgacgttcctgaggg acaacaactttgatggacttgatatggactgggagtatccggccagaaggggcggggccgccgctgattataccaatttt ggacttaacatggacttcatttgcctgatgacgtatgatttcaacggagcctggggtagtgttactggccacaacagtcc acttgatgcttcctcggctgatgcagacaaaacatggaacatgaaatgggcatctgcttactggcaccagttaggattac caaaggacaagctgatagttggtctagccacttatgggcgagcctttaccttgtctgatcccaacaattatggtgtaggt gcaccaacagtatcaggttcagctccgtctggaccttatacgagggagaaaggattcttcgcttattacgagatctgtga gatgcagaacagtggcagtggtacaacctatcgtgatacagaggcgatggtcccatactacgtagatggcacaacatggg ttggctttgatgatgaaataagcatccataacaaagttcaaaatttcattatttccaatggctacggaggcgctatggtg tgggcacttcccctggatgattttaaagcaaattgcggctcaaagaaatttcctctgatcaacaaaataaaggagatatt cgaagctgacgagaatggtggttcagtaaatccccctactgcagccccgacagcggcccccacggctgcaccaacagccg ctcctacggctgcacccacagccgctcctacgactgccccgacagccgctccaacggctggtccaacagcggcccccaca gctggcccaacagcagctcccacacagggacctacggcgggacctacaggtgctccaacatcccattctcctggcggcaa cgtcataacaacttgccttggaatgccgaacggatatatttacccagatttagctaattgcaagaacttttaccagtgtg ccaattccgtgccctttataaagacctgccctgggactctgttatttgatcacgtgtctagcaattgtcaatggagtaac cttgtggactgctccaggggaggagtaacaacagctgccgtaccagctaccaccactaccaccactcagcgtcccaccac gtcaaccgcgtcaccaactaccacaaccactcctatccctaccacaacaaggccggatgtaacatcgggtcccagtagct tctgtgcagacaagccaaacggattacatggtgatcccggggactgcgctggctactacaactgctgggcagggagaggg aaccagctgaaatgttatggaggtcttctatggaaccaggcagtcaaatattgtgattatcccgatcgagtaaattgtgt gagatctgacgtcataaccaagcagccgcctgccacgtcagccagaacaaccgagcagcccgaagttatgacgacaacag tgacaccagtatctacgaataacccagtggaagggatggattgtacaacgcttgctaatggtttatacaactatccagga aactgtggcggaaagtacaagagagtatgttattacacaaactggtcacagtacagaagcagtgagggcaaattctggcc agaggacatcgaccctttcctatgtactcacatcatgtattcatttggaaaacttgtgggaaatacaattaccaattacg aatggaacgacccagatgaagattgggctgacggtctttacacacgagtcaataacctgaagaaacagaataaagacttg aaggtcctcttagcaatgggaggctggaacgctggtagtttagtgtactcccagatgtcttctacacccaataacagaag ggaatttattgactctgccctggagttcctgagggacaacaactttgatggacttgatatggactgggagtatccggcca gaaggggtggggccgctgccgattttaccaattttggacttttagttgaggaattgcgacaagcattcgaaatcgaagct tctcaaactggcaatgacagattgctgcttactgctgctgtggctgctggaaaaacgaatattgatggtgtttacgatgt acctctgatggctgcaaacatggactttatttgcctgatgacgtatgattttaacggagcctggggtagtgttactggtc acaacagtcctcttgatgcttcctcggctgatgcggacaaaacatggaacatgaaatgggcagctgcttactggcaccag ctaggattgccaaaggacaagctgatagttggtctagccacttatgggcgagcctttactttgtctgatcccaacaatta tggtgtaggtgcaccaacagtatcaggttcagcaccgtctggaccttatacgaaagaaaaaggattcttgtcctattatg agatttgcagtttgcagaacagtggctatggtaccacctaccgtgacccagaagctatggtaccgtactttgtagagggc actgtatggatcggattcgatgacgaaataagcattcataacaaataccacctgcctcaacgcctgctcccacggcgggc cctacagcaggtcctacacaaggccccacggcgggaccaactggtgccccaacaacccagtcacctggtggttcaggctt ttgtgcgggtaagtcgaatggacttcatgctgaccctaacgactgcgcagcattttacaattgctggaatggagaaggaa gccaggaaaggtgcacgggaggactactgtggaaccaagctgccaagtgctacaacaaagcgaccttcaaccaatcaacc accgactgctgccccaacgaccaaaaaaccgtcaactgatggtcccattggagtagtggattgctctacacttccggatg gtatgtacaactacccaggggactgtaacaaattcatcacctgtaccaatggagtcagttttgacggaacctgccatccc tctctccattttaacatggagatacaaacttgtgactggccggaaaatgcaggatgtcaacgatga |
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Protein
| Protein ID | pfu_aug2.0_21.1_03435.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_21.1_03435.t1 MKFLLILQISVLSFCAVLGKYKRVCYYTNWSQYRSGIGKFWPEDIDPFLCTHIMYSFGKLEGNKITNFEWNDPDTDWAEG LYTRVNNLKKQNTDLKVLLAMGGWNAGSLVYSQMSSTPNNRREFIDSALTFLRDNNFDGLDMDWEYPARRGGAAADYTNF GLNMDFICLMTYDFNGAWGSVTGHNSPLDASSADADKTWNMKWASAYWHQLGLPKDKLIVGLATYGRAFTLSDPNNYGVG APTVSGSAPSGPYTREKGFFAYYEICEMQNSGSGTTYRDTEAMVPYYVDGTTWVGFDDEISIHNKVQNFIISNGYGGAMV WALPLDDFKANCGSKKFPLINKIKEIFEADENGGSVNPPTAAPTAAPTAAPTAAPTAAPTAAPTTAPTAAPTAGPTAAPT AGPTAAPTQGPTAGPTGAPTSHSPGGNVITTCLGMPNGYIYPDLANCKNFYQCANSVPFIKTCPGTLLFDHVSSNCQWSN LVDCSRGGVTTAAVPATTTTTTQRPTTSTASPTTTTTPIPTTTRPDVTSGPSSFCADKPNGLHGDPGDCAGYYNCWAGRG NQLKCYGGLLWNQAVKYCDYPDRVNCVRSDVITKQPPATSARTTEQPEVMTTTVTPVSTNNPVEGMDCTTLANGLYNYPG NCGGKYKRVCYYTNWSQYRSSEGKFWPEDIDPFLCTHIMYSFGKLVGNTITNYEWNDPDEDWADGLYTRVNNLKKQNKDL KVLLAMGGWNAGSLVYSQMSSTPNNRREFIDSALEFLRDNNFDGLDMDWEYPARRGGAAADFTNFGLLVEELRQAFEIEA SQTGNDRLLLTAAVAAGKTNIDGVYDVPLMAANMDFICLMTYDFNGAWGSVTGHNSPLDASSADADKTWNMKWAAAYWHQ LGLPKDKLIVGLATYGRAFTLSDPNNYGVGAPTVSGSAPSGPYTKEKGFLSYYEICSLQNSGYGTTYRDPEAMVPYFVEG TVWIGFDDEISIHNKYHLPQRLLPRRALQQVLHKAPRRDQLVPQQPSHLVVQAFVRVSRMDFMLTLTTAQHFTIAGMEKE ARKGAREDYCGTKLPSATTKRPSTNQPPTAAPTTKKPSTDGPIGVVDCSTLPDGMYNYPGDCNKFITCTNGVSFDGTCHP SLHFNMEIQTCDWPENAGCQR |
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