Gene
| Gene Model ID | pfu_aug2.0_21.1_03440 |
|---|---|
| Locus | scaffold21.1 : 557817 ... 567066 : + |
| To GenomeBrowser | scaffold21.1:557817..567066 |
| Genes list of scaffold | scaffold21.1 |
| Synonym | pfu_aug1.0_16646.1_03733 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| alpha-mannosidase 2 | GO:0007275 GO:0016798 GO:0048856 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_21.1_03440.t1 | 2 | 1 | Glyco_hydro_38 | 177 | 290 | 0.0 | 330.5 | 2.2e-36 | 6.4e-33 | 114.1 |
| pfu_aug2.0_21.1_03440.t1 | 2 | 2 | Glyco_hydro_38 | 467 | 779 | 0.0 | 330.5 | 0.0 | 0.0 | 220.0 |
| pfu_aug2.0_21.1_03440.t1 | 2 | 1 | Alpha-mann_mid | 683 | 704 | 6.1e-19 | 68.0 | 3.8 | 11000.0 | -3.4 |
| pfu_aug2.0_21.1_03440.t1 | 2 | 2 | Alpha-mann_mid | 786 | 871 | 6.1e-19 | 68.0 | 5.5e-22 | 1.6e-18 | 66.6 |
| pfu_aug2.0_21.1_03440.t1 | 1 | 1 | Glyco_hydro_38C | 926 | 1258 | 2.9e-27 | 95.6 | 1.7e-30 | 5.1e-27 | 94.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_21.1_03440.t1 | gi|573877668|ref|XP_006627077.1| | PREDICTED: alpha-mannosidase 2-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_21.1_03440.t1 | gi|637318210|ref|XP_008112214.1| | PREDICTED: alpha-mannosidase 2 [Anolis carolinensis] | 0.0 |
| pfu_aug2.0_21.1_03440.t1 | gi|543280691|ref|XP_005428084.1| | PREDICTED: LOW QUALITY PROTEIN: alpha-mannosidase 2, partial [Geospiza fortis] | 0.0 |
| pfu_aug2.0_21.1_03440.t1 | gi|542163694|ref|XP_005490487.1| | PREDICTED: LOW QUALITY PROTEIN: alpha-mannosidase 2, partial [Zonotrichia albicollis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_21.1_03440.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_21.1_03440.t1 atgaggcatgtaaggaaaaagcttattgtgggactacttttcacggtctctcttcttatcatcactattttcagaaaaga ctatttagttttgagatttgaccaaatatcggaggaaaacattcgccgtacaggtgacagacaaagcgcaaagcaagata tacatcaaagagacagccctgagcctaaaacgaacatgaggagggatacaatttcttttgaaaatacaaatttagaatcg gacaaacagaagaacaaagacagaaattcgcgtcacactgacggtaaaccgggaacaaccatcaattctgagacttttcg caccgcttacgttaatgcacagttggataatgtacttaacaatacgtacaacgaaaatgaagtaaaaatagtagatttta aatgtactggagggtttaaagctgctaaaacagattactcaatgtcggaaatcttgaataaagtgcaatatgagaaggga aggagctacgattatgatagaagtgcagacaactcatcttacttagatgtcatcattttgccacagtcgcacaacgatcc gggatggctcatgcctttcgaagcttactataaaaacaaaacagttaacatattagataacatggtgaagtatttgacaa tgtactctaagatgacaatgatctggccggaggtcatattcctagacaggtggtggagggaagcatcgacagattcacga caaaaactaaaggctttgattgagagtggccgcctggagatcgtatccgggggttgggtatcacccgacgaggcgacctc ccattactacactgtccttgaccagctcattgagggacaccaatggctgaggaagaacataggaacagatatgtggcatg tgaggaaaaagcttatagtgggactacttttcacggtctctcttcttatcatcactattttcagaaaagactatttagtt ttgagatttgaccaaatatcggaggaaaacatccgccgtacaggtgacagacaaagcgcaaagcaagatatacatcaaag agacagccctgagcctgaaacgaacatgaggagggacacaatttcttttgaaaatacaaatttagaatcggacaaacaga aggacaaagacagaaattcgcgtcacactgacggtaaatcgggaataaccgtcaattctgagacgtttggcacttcttac ggtaatgcacaattggataatgtacttaacaacacgtacaatgaaaatgaagtaaaagtagtagattttaaatgtactgg agggtttaaaactgctaaaacagattactcaatgccggaaatcttgaataaagtgcaatatgagaagggaaggagctacg attatgatagaagtgcagacaactcatcttacttagatgtcatcattttgccacagtcgcacaacgatccgggatggctc atgcctttcgaagcttactataaaaataaaacagtcaacatattagataacactgtgaagtatttgacaatgtactctaa gatgacaatgatctggccggaggtcatattcctggacaggtggtggagggaagcatcgacagattcacggcaaaaactaa aggctttgattgagagtggccgcctggagatcgtatccgggggttgggtatcacccgacgaggcgacctcccattactac actgtccttgaccagctcattgagggacaccaatggctgaggaagaacataggtgtacagccggtcaatacttggccgct tgaccagtttggctactcatcttcgcttccttatatatggaagaaagccggtatgaacaatctaggtataatgagagtaa ctcaaaacgttaagtcatattttgctcggcataaaattatgaattttcgttggcggcagccgtgggatttgaatggagat aacgatattctgtgttacgtagaaccgtacagatggtttgtgacagatgtgagttgcgggccaagtactgtcatctgcaa tagtctgttgtttcataaaaagagtgagagaacgaccatgccgatgttaaatagaatttcagaaaatctagtggaacaat tcaagttgaaggcttcgcttaataaacagaaagtcatcgttgtggctctggggaatgattttgcatatgacactgttaaa gaatggagagctcagtacaacaacgtaactgcacttatcaactatgttaacgataggaaaagtcaatttggtgtgacgat gcgttttggtacagttaaggattactttaatacaattagacatttacaggaaactgacagttataaaactttatccgggg actttttcacatacgccgaggatgacatgggtacggagtattggagtgggtactttactacaagagcatttgacaaacga attggaaggactcttatggagcatgtcagatcggcggaaatactcactgcgtttgcgttgtcacatacagataaaggaag tcatgatgagatggtagtgtccatgttgaaggaattggagtacgcccgtcaagccctagctctctttcagcatcatgatg ccatcacgggaacctctacacatagcaccgcaactgactataggaaacgcttacatatcgctctgattagctgtggaagg ataatgacacatactatacgcaaaatcattcagtcaaagacacaactccacgacctagaagttataccgctcgttgaaca gtcaaactatctcgaccaagttaaacgtagaacaataggtttagagaaggacagagtattgttagtttggaacagttatg aacgtgcaagagacgagattgtgtgtgtactgacgaatataagtgattcagatatctctataactaagcttacaggagag gaggttgagtcccagttcaatccttactttgacggggaagggggtttatcgttagataaaatggagttatgttttaaagt aagtgtccctccttttgggggaggtttttacagaataaacatattgaatacaagtctaacggagtccagattagcgtcct tgtggagcagtgtcagttacaataggaaagtatcatggccgcaactggaagtttcgaacaaatttactttaagaaacacg tacttaaacgtttattttgacaagtctggtgatttacataaagtctgtagcagtacttcaaacaactcttgctcattaat ctccataaactggtcatatttcatgacatcagcagatgcttacatttttgttccaaatagaatgccaagatatttagagt ctttagaacgtcatgtgtgcgtcatttccggaaatctcatatcgcgtgttattgtatctactaaactttatcggcaggtt tttacgttatataactcaaatagtctacagggaatgactgttcatatagaaaataatgtttctctcgtggaatctagcga aaatggaaaagaaattctaatgaatatcgtcacgaatttaaataccacgcaaaagttttacaccgattcaaatagtttgt acatgctacgtcgagactggcgttcaagccttccgattggcgcgaacttttatccaatgacatctcaagcattcgttgag gaccaatcaaaaagggttacacttcattctgcacagcctttaggcgttggaagtttatttgcaggaacgttgaatatcct cgtagacagaaagccaacgaggagcggaaaaggacttactgaagctgtgttggataacagaccaactataagtaaattct gtcttcaagtagaacattttagtaactcttttacatcgaactcatcgtctgaatcatcgatgtttccttcgatgaccagt tctttcatcaatgatattttacaggctccgctgttgaattttatcatctcatctactttgaaaggttttgatttactttc tcagtcgatatcctttttaaacgagcatttaccgtgtgattatacaatagctaactttagaaactttattgacgatggtg tttggaatggctctggcataacattgcaccgcagagcaacatcatgtaaagaaaaatatgcagagtttccctgcagcttt gatgatgacactttaagcttatataaattattcagcattttacctcatgatatttataaatctagtcttacacattttca tatttatcaaaagttggaaagatactttcgtttgaatacaatggatttagaatcatacgtaataaaatggaaatga |
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Protein
| Protein ID | pfu_aug2.0_21.1_03440.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_21.1_03440.t1 MRHVRKKLIVGLLFTVSLLIITIFRKDYLVLRFDQISEENIRRTGDRQSAKQDIHQRDSPEPKTNMRRDTISFENTNLES DKQKNKDRNSRHTDGKPGTTINSETFRTAYVNAQLDNVLNNTYNENEVKIVDFKCTGGFKAAKTDYSMSEILNKVQYEKG RSYDYDRSADNSSYLDVIILPQSHNDPGWLMPFEAYYKNKTVNILDNMVKYLTMYSKMTMIWPEVIFLDRWWREASTDSR QKLKALIESGRLEIVSGGWVSPDEATSHYYTVLDQLIEGHQWLRKNIGTDMWHVRKKLIVGLLFTVSLLIITIFRKDYLV LRFDQISEENIRRTGDRQSAKQDIHQRDSPEPETNMRRDTISFENTNLESDKQKDKDRNSRHTDGKSGITVNSETFGTSY GNAQLDNVLNNTYNENEVKVVDFKCTGGFKTAKTDYSMPEILNKVQYEKGRSYDYDRSADNSSYLDVIILPQSHNDPGWL MPFEAYYKNKTVNILDNTVKYLTMYSKMTMIWPEVIFLDRWWREASTDSRQKLKALIESGRLEIVSGGWVSPDEATSHYY TVLDQLIEGHQWLRKNIGVQPVNTWPLDQFGYSSSLPYIWKKAGMNNLGIMRVTQNVKSYFARHKIMNFRWRQPWDLNGD NDILCYVEPYRWFVTDVSCGPSTVICNSLLFHKKSERTTMPMLNRISENLVEQFKLKASLNKQKVIVVALGNDFAYDTVK EWRAQYNNVTALINYVNDRKSQFGVTMRFGTVKDYFNTIRHLQETDSYKTLSGDFFTYAEDDMGTEYWSGYFTTRAFDKR IGRTLMEHVRSAEILTAFALSHTDKGSHDEMVVSMLKELEYARQALALFQHHDAITGTSTHSTATDYRKRLHIALISCGR IMTHTIRKIIQSKTQLHDLEVIPLVEQSNYLDQVKRRTIGLEKDRVLLVWNSYERARDEIVCVLTNISDSDISITKLTGE EVESQFNPYFDGEGGLSLDKMELCFKVSVPPFGGGFYRINILNTSLTESRLASLWSSVSYNRKVSWPQLEVSNKFTLRNT YLNVYFDKSGDLHKVCSSTSNNSCSLISINWSYFMTSADAYIFVPNRMPRYLESLERHVCVISGNLISRVIVSTKLYRQV FTLYNSNSLQGMTVHIENNVSLVESSENGKEILMNIVTNLNTTQKFYTDSNSLYMLRRDWRSSLPIGANFYPMTSQAFVE DQSKRVTLHSAQPLGVGSLFAGTLNILVDRKPTRSGKGLTEAVLDNRPTISKFCLQVEHFSNSFTSNSSSESSMFPSMTS SFINDILQAPLLNFIISSTLKGFDLLSQSISFLNEHLPCDYTIANFRNFIDDGVWNGSGITLHRRATSCKEKYAEFPCSF DDDTLSLYKLFSILPHDIYKSSLTHFHIYQKLERYFRLNTMDLESYVIKWK |
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