Gene
| Gene Model ID | pfu_aug2.0_21.1_03444 |
|---|---|
| Locus | scaffold21.1 : 660298 ... 662912 : - |
| To GenomeBrowser | scaffold21.1:660298..662912 |
| Genes list of scaffold | scaffold21.1 |
| Synonym | pfu_aug1.0_1459.1_22600 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| neuronal acetylcholine receptor subunit alpha-7-like | GO:0006810 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_21.1_03444.t1 | 1 | 1 | Neur_chan_LBD | 29 | 225 | 2.1e-35 | 121.8 | 8.2e-39 | 3.0e-35 | 121.3 |
| pfu_aug2.0_21.1_03444.t1 | 2 | 1 | Neur_chan_memb | 234 | 317 | 3.5e-14 | 53.2 | 9.3e-18 | 3.5e-14 | 53.2 |
| pfu_aug2.0_21.1_03444.t1 | 2 | 2 | Neur_chan_memb | 326 | 346 | 3.5e-14 | 53.2 | 0.15 | 550.0 | 0.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_21.1_03444.t1 | gi|524874027|ref|XP_005093755.1| | PREDICTED: neuronal acetylcholine receptor subunit alpha-7-like isoform X1 [Aplysia californica] | 2.99878e-43 |
| pfu_aug2.0_21.1_03444.t1 | gi|524892987|ref|XP_005103015.1| | PREDICTED: neuronal acetylcholine receptor subunit alpha-7-like [Aplysia californica] | 3.9937e-43 |
| pfu_aug2.0_21.1_03444.t1 | gi|524890191|ref|XP_005101644.1| | PREDICTED: neuronal acetylcholine receptor subunit alpha-7-like [Aplysia californica] | 7.00005e-41 |
Transcript
| Transcript ID | pfu_aug2.0_21.1_03444.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_21.1_03444.t1 atggaaatggattttgctttagttaaagttttgatatttgtttgtttctctgttgaatcgatgtgttacattacaaacac tatgaaaatatatgacaaaatatttaaagaatataacaaactatttagaccaatattgaatgagcacgatgcgatgaaca ttacagtgatattcataccgaggggaattgttgaatttgatgaagtggaagggagcgtttctgttgccatggcaatagac atcaggtgggtagatgctttcttaaagtggaatccaagacaatatggaaacgtcggaacgataattttaccagacgatca gatttggaaacctttcctggctctagcaaacccaaaaggggacggaatcctttttgcagatagcccattcaaagtacgcg tattctacaacggcacaattgtttggttgaccgcgggaacgctgacagtggcgtgtaaacctgacgtcagaaattatcct tttgacgtacatagctgtagtgtcaaaatattcccaatggacgaaatcatacgtgaaattcgtctacattccgatcttaa acttcatgtatttgacaacttcggacaatgggacatgattcatgagggagtgtacgatgacatgttggatatattttctc taactgtatttcacttcaaaatcagacggcgaccgcagttttctgttcttggaatctgcttacctattcttttcatcgga attatgaacgcatgcgtatttattatacccccggcttccggtgagaggatatcgtttgctatcacggtacttttggctct tgtagtgtttatgacgattgtccactcttccatgccaaagaactcggaccctgtacctattttgtcctatgtattgatgg tcatgatgatagaaagtggactagtggtttttcttaccgtgatgagtctgcgattccatttgaatcaacaaatgtcagat gatgatttcatctttaagatcaagcccgctctctttgacagattttgtttctggatttctttaatagcgtttgttacaac agtatgtggctttatcttaggactttatgtacgcaaacaatccaatacataa |
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Protein
| Protein ID | pfu_aug2.0_21.1_03444.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_21.1_03444.t1 MEMDFALVKVLIFVCFSVESMCYITNTMKIYDKIFKEYNKLFRPILNEHDAMNITVIFIPRGIVEFDEVEGSVSVAMAID IRWVDAFLKWNPRQYGNVGTIILPDDQIWKPFLALANPKGDGILFADSPFKVRVFYNGTIVWLTAGTLTVACKPDVRNYP FDVHSCSVKIFPMDEIIREIRLHSDLKLHVFDNFGQWDMIHEGVYDDMLDIFSLTVFHFKIRRRPQFSVLGICLPILFIG IMNACVFIIPPASGERISFAITVLLALVVFMTIVHSSMPKNSDPVPILSYVLMVMMIESGLVVFLTVMSLRFHLNQQMSD DDFIFKIKPALFDRFCFWISLIAFVTTVCGFILGLYVRKQSNT |
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