Gene
| Gene Model ID | pfu_aug2.0_21.1_03446 |
|---|---|
| Locus | scaffold21.1 : 689412 ... 690902 : - |
| To GenomeBrowser | scaffold21.1:689412..690902 |
| Genes list of scaffold | scaffold21.1 |
| Synonym | pfu_aug1.0_26404.1_69771 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| neuronal acetylcholine receptor subunit alpha-6-like | GO:0006810 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_21.1_03446.t1 | 1 | 1 | Neur_chan_LBD | 19 | 174 | 4.5e-32 | 110.9 | 8.2e-36 | 6.1e-32 | 110.5 |
| pfu_aug2.0_21.1_03446.t1 | 1 | 1 | Neur_chan_memb | 223 | 318 | 2.5e-18 | 66.8 | 5.3e-22 | 3.9e-18 | 66.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_21.1_03446.t1 | gi|676440553|ref|XP_009049214.1| | hypothetical protein LOTGIDRAFT_53687, partial [Lottia gigantea] | 7.0e-38 |
Transcript
| Transcript ID | pfu_aug2.0_21.1_03446.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_21.1_03446.t1 atggttctttatagttttccttttgtggaaaacttggcatcacatgaacatggcattttgaactggatatcaagaaacca caacgtcttgatcgggccgtactcttcaaaaaagtcgtatcttaacgtatcagtaacaataattccaagaggggttgcta gctttgatgaggttgccggacagatttccgttgccatggcagcggatatcagatggagagacgaaagtttgtcatggaat atttacaaatatggaaatgtatctagcctaattttacctgaggaatctgtatggaaacccaaaatcgccttgacaaaccc tattggcaggtccatactgttttcagaggataagttcaatgttcgtgtgtatccaaacggtaacgtcatctggcttaagg caggtactgtaactacaacttgtaaaccttttgttaaatattatccattcgatatacatcattgtagcataaaacttttt ccaatgggacatatagtgaaagaaatacagctgattccaagtataagaatgcgtgtttttgaaaactttggaccttggaa tcttttcaacgaaagtgtccattcggaaatattagatgtattttcgcttttatcttttgatttcaacatcaaacgccgtc ccgagttttctctacttagtctctgtttaccgatacttttgctcggctttttgaactcatgtgtgtttttaattccgccg gaatccggagaaagaatttcctacgcaatcaccgtcttactgtcttttgctgttttcatgactgtcataagtgcaaacat gccgaaaaactctgatccggttccggtcctatgctatgttctcatggtcatgatgggggagagtggtgttattgtcattt ttacaatatatggtctgcgtttgcacttcaggaaagaaacacacccgattccccgattattacgttttacatcaaaagga ctatccagaaatacctctccatctcagtccatcagtggaatgtgtacatcggatgaaaatgtcgtcaaacaaaacgaaac ttgtgacaccatattcaacaaatatttcgggtcttggaaaagagttgccgaaatctacgattactgtcttcttgtcattt ccgccttggtttctactgtggccgtcatttactatgtggctgccgtgtatggaaatatagattctttttga |
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Protein
| Protein ID | pfu_aug2.0_21.1_03446.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_21.1_03446.t1 MVLYSFPFVENLASHEHGILNWISRNHNVLIGPYSSKKSYLNVSVTIIPRGVASFDEVAGQISVAMAADIRWRDESLSWN IYKYGNVSSLILPEESVWKPKIALTNPIGRSILFSEDKFNVRVYPNGNVIWLKAGTVTTTCKPFVKYYPFDIHHCSIKLF PMGHIVKEIQLIPSIRMRVFENFGPWNLFNESVHSEILDVFSLLSFDFNIKRRPEFSLLSLCLPILLLGFLNSCVFLIPP ESGERISYAITVLLSFAVFMTVISANMPKNSDPVPVLCYVLMVMMGESGVIVIFTIYGLRLHFRKETHPIPRLLRFTSKG LSRNTSPSQSISGMCTSDENVVKQNETCDTIFNKYFGSWKRVAEIYDYCLLVISALVSTVAVIYYVAAVYGNIDSF |
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