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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_210.1_00426
Locus scaffold210.1 : 37116 ... 42895 : +
To GenomeBrowser scaffold210.1:37116..42895
Genes list of scaffold scaffold210.1
Synonym pfu_aug1.0_20147.1_61975

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_210.1_00426.t1 2 1 CBM_14 23 68 1.6e-11 43.9 1.1e-08 0.00017 21.4
pfu_aug2.0_210.1_00426.t1 2 2 CBM_14 106 160 1.6e-11 43.9 9.6e-11 1.4e-06 28.0

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_210.1_00426.t1 gi|524883417|ref|XP_005098339.1| PREDICTED: uncharacterized protein LOC101862413 [Aplysia californica] 6.0e-09
pfu_aug2.0_210.1_00426.t1 gi|524866675|ref|XP_005090156.1| PREDICTED: uncharacterized protein LOC101857459 [Aplysia californica] 1.0e-06

Transcript
Transcript IDpfu_aug2.0_210.1_00426.t1
Definition-
>pfu_aug2.0_210.1_00426.t1
atgcatcctttgacacttttatcgagttttctgagtgtattgatgatgaccgatgccgcgtccgtctgtaagtccggcca
aacatgggtccctgatccagatgactgttcgtctttctggctgtgcctgcccttcatgacagctaagtacaagtgtcctg
gcgatactgtcaccaaccatcttatggaagcatgcgtgccaaaaggatcgcacatggacatatgttcgaaaaaggatcaa
gacagcaagaaaacaacactgaaatcaattctaactacaacaaaagcgccagaactatcaccaatagagaaaatgtgcca
agaaaacccgaccgctatcattcctcatcctcaacattgtgctaaatatatcaactgttctagaatcaaggaggagcacc
agggtgtaggtgaatgtccctaccctatgttgtgggaagaaacatccaaaaagtgcgcaaaacatgaactgaccaaatgt
gaagaaaggtttgagcccatcgatccgtgggtcgaaagtatagaggccacaaaatgttactaa

Protein
Protein IDpfu_aug2.0_210.1_00426.t1
Definition-
>pfu_aug2.0_210.1_00426.t1
MHPLTLLSSFLSVLMMTDAASVCKSGQTWVPDPDDCSSFWLCLPFMTAKYKCPGDTVTNHLMEACVPKGSHMDICSKKDQ
DSKKTTLKSILTTTKAPELSPIEKMCQENPTAIIPHPQHCAKYINCSRIKEEHQGVGECPYPMLWEETSKKCAKHELTKC
EERFEPIDPWVESIEATKCY

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