Gene
| Gene Model ID | pfu_aug2.0_210.1_00428 |
|---|---|
| Locus | scaffold210.1 : 96976 ... 97951 : + |
| To GenomeBrowser | scaffold210.1:96976..97951 |
| Genes list of scaffold | scaffold210.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_210.1_00428.t1 | 1 | 1 | RVT_1 | 84 | 247 | 8.9e-28 | 97.0 | 7.9e-32 | 1.2e-27 | 96.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_210.1_00428.t1 | gi|390348600|ref|XP_003727036.1| | PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_210.1_00428.t1 | gi|390366000|ref|XP_003730946.1| | 0.0 | |
| pfu_aug2.0_210.1_00428.t1 | gi|390359309|ref|XP_003729454.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_210.1_00428.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_210.1_00428.t1 atgcctccagtttcgaaaacttgtgactcagtaattccagatatcatcattaatgaggagggtgtcttgaagctgttaaa aaacatccaaactgcaaaagcgcctggaccggattctatcccgaatagagttttgaaagaatgtgcaaccgagcttgccc ctagtatcgcactactcttccaaaagtcactagatacaggatgcctaccgagggattggttaaatgccaatatagcccca gtctttaagaaaggagatcgtcatctccccgagaactaccgtccggtttctttaacttctgtgttaagtaaattactgga gcacgtagtatgtcgacacatcatgaagcactttgagcgccataacattctgacatctttaaatcatggtttccgaacgg gatattcttgtgagacgcagttagccgtcacggtagaagatcttacctccagttttgatcgtgggatacaaaccgacatt gccatattagatttttctaaggcgtttgatacggtgccgcaccacaaattactgcacaaactacacgcctatggaattcg tggacgtctacatcactggattgagtctttcttatgtcaccgcatgatgaaagtcgtagtagagggggaatgctctcgag aggtcacagtcgactcaggggtgccacagggtaccgtattaggaccccttctcttcctttgtcatattaatgacttgccg gactcggtccagtccnccttctcagtgtccaaggataaatcacttgtgcaagtttag |
|
Protein
| Protein ID | pfu_aug2.0_210.1_00428.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_210.1_00428.t1 MPPVSKTCDSVIPDIIINEEGVLKLLKNIQTAKAPGPDSIPNRVLKECATELAPSIALLFQKSLDTGCLPRDWLNANIAP VFKKGDRHLPENYRPVSLTSVLSKLLEHVVCRHIMKHFERHNILTSLNHGFRTGYSCETQLAVTVEDLTSSFDRGIQTDI AILDFSKAFDTVPHHKLLHKLHAYGIRGRLHHWIESFLCHRMMKVVVEGECSREVTVDSGVPQGTVLGPLLFLCHINDLP DSVQSXFSVSKDKSLVQV |
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