Gene
| Gene Model ID | pfu_aug2.0_210.1_00430 |
|---|---|
| Locus | scaffold210.1 : 108416 ... 129415 : + |
| To GenomeBrowser | scaffold210.1:108416..129415 |
| Genes list of scaffold | scaffold210.1 |
| Synonym | pfu_aug1.0_4628.1_01780 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dna replication licensing factor mcm2 | GO:0000785 GO:0003678 GO:0003688 GO:0005524 GO:0005664 GO:0005737 GO:0006268 GO:0006270 GO:0006334 GO:0015630 GO:0042393 GO:0042555 GO:0071353 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_210.1_00430.t1 | 1 | 1 | MCM2_N | 63 | 182 | 6.9e-28 | 97.5 | 4.7e-31 | 1.4e-27 | 96.6 |
| pfu_aug2.0_210.1_00430.t1 | 1 | 1 | MCM_N | 197 | 265 | 3.5e-10 | 40.4 | 2.9e-13 | 8.5e-10 | 39.1 |
| pfu_aug2.0_210.1_00430.t1 | 1 | 1 | MCM | 436 | 568 | 0.0 | 194.8 | 0.0 | 0.0 | 194.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_210.1_00430.t1 | gi|524903862|ref|XP_005108123.1| | PREDICTED: DNA replication licensing factor mcm2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_210.1_00430.t1 | gi|676489658|ref|XP_009065011.1| | hypothetical protein LOTGIDRAFT_168864 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_210.1_00430.t1 | gi|632946383|ref|XP_007888531.1| | PREDICTED: DNA replication licensing factor MCM2 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_210.1_00430.t1 | gi|390349776|ref|XP_784985.3| | PREDICTED: DNA replication licensing factor mcm2 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_210.1_00430.t1 | gi|675858390|ref|XP_009014755.1| | hypothetical protein HELRODRAFT_191161 [Helobdella robusta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_210.1_00430.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_210.1_00430.t1 atggacataagtggcagatccaaggagttcatggagaaggacgatacatcttcagatccattctccacagcaacaagtcc atctcgggcatcaagggggcgtaggagtagtagaggagaccctattacatcaagcccaggccgagacctaccaccgtttg aagatgattccgaattactaggcaatccagctggtgaagaagaagaagaagatggggaagaattgtttggagacaacttg gaacaagattaccgcgctattccagcattagacagatttgatcaggaggggctagatgacgatgatgattactcagaaat gtcagaatcgcaacgtcaagctgctgagagagaaatcagacggagagagagggcagagggtatcacagctggacggatgc ggacaggacttatgtatgaggaatctgatgaggaagatgacgcagcgcccagaaaacgtcgacgtgcggagagagcagcg gaaggtgacattgaagatgaagagatggttgaaagtattgaaaacttggaagacatgaaggggcatcccatcagagaatg ggtaacaatgctgggaccgaaaactgagatcaaaaacaggttcaagaacttcttaaggacatttgttgactccaagggac acaatgtatacagagaaaagataagacagatggttgaagcaaacagagagagtttggtgatagattatggtatgttagca tcagtggaacaagttcttgcttacttcctcccagaagctcctgcagaaatgttggctaactttgatgaggcaagttctat ttatctttacatgtacatacagcttcatttgaatcaattgatacgtactagtggagtgatcacaagctgtactggagttc taccacagctcagtgtcatcaagtacgattgtaacaagtgtaactttatactgggaccattctatcagacccaaaaccag gaagtcaaaccaggatcatgcccagagtgtcagtccacagggccatttgagattaatatggagcagacactgtataaaaa ttaccaacgggttacgatacaagaaagtcccggcaaagtgccagcaggaaggttgcctaggtcaaaagatgccattttgt tagatgatttggtggattcgtgtaagccaggagatgagttggaattaacaggtatttatcacaataactatgacgggtca ctgaatacaaataacggattcccagtgtttgctacggtgatacatgctaactacattaccaagaaggatgataaactcgc cctcagtgctctgacagatgaagatatcaaggctgtagtacagttatctaaggacgagaggattggagagaggatctttg ccagtatggcaccatcaatctatggacacgaagacatcaagaaggctgtggcattatcaatatttggtggagagcctaaa aatcccggaggtaaacataaagtcagaggagacatcaatgcacttatctgtggggaccctggtactgccaaatctcagtt cctcaagtatgtggaaaagactgctccacgtgtggtgttcacgactggtcaaggagcatcagctgttggcttaaccgctt atgtccagaggaatccagtttccaaggagtggacgttagaggcaggtgccttggtgcttgcagacaaaggaatgtgtctg atagatgagtttgataaggtatcctatacatgtttctga |
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Protein
| Protein ID | pfu_aug2.0_210.1_00430.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_210.1_00430.t1 MDISGRSKEFMEKDDTSSDPFSTATSPSRASRGRRSSRGDPITSSPGRDLPPFEDDSELLGNPAGEEEEEDGEELFGDNL EQDYRAIPALDRFDQEGLDDDDDYSEMSESQRQAAEREIRRRERAEGITAGRMRTGLMYEESDEEDDAAPRKRRRAERAA EGDIEDEEMVESIENLEDMKGHPIREWVTMLGPKTEIKNRFKNFLRTFVDSKGHNVYREKIRQMVEANRESLVIDYGMLA SVEQVLAYFLPEAPAEMLANFDEASSIYLYMYIQLHLNQLIRTSGVITSCTGVLPQLSVIKYDCNKCNFILGPFYQTQNQ EVKPGSCPECQSTGPFEINMEQTLYKNYQRVTIQESPGKVPAGRLPRSKDAILLDDLVDSCKPGDELELTGIYHNNYDGS LNTNNGFPVFATVIHANYITKKDDKLALSALTDEDIKAVVQLSKDERIGERIFASMAPSIYGHEDIKKAVALSIFGGEPK NPGGKHKVRGDINALICGDPGTAKSQFLKYVEKTAPRVVFTTGQGASAVGLTAYVQRNPVSKEWTLEAGALVLADKGMCL IDEFDKVSYTCF |
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