Gene
| Gene Model ID | pfu_aug2.0_210.1_00435 |
|---|---|
| Locus | scaffold210.1 : 200485 ... 217508 : - |
| To GenomeBrowser | scaffold210.1:200485..217508 |
| Genes list of scaffold | scaffold210.1 |
| Synonym | pfu_aug1.0_6882.1_24102 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_210.1_00435.t1 | 3 | 1 | DUF2419 | 190 | 255 | 7.9e-37 | 127.0 | 0.018 | 260.0 | 0.6 |
| pfu_aug2.0_210.1_00435.t1 | 3 | 2 | DUF2419 | 445 | 512 | 7.9e-37 | 127.0 | 2.5e-25 | 3.6e-21 | 75.6 |
| pfu_aug2.0_210.1_00435.t1 | 3 | 3 | DUF2419 | 537 | 593 | 7.9e-37 | 127.0 | 3.7e-17 | 5.5e-13 | 48.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_210.1_00435.t1 | gi|736236698|ref|XP_010783826.1| | PREDICTED: uncharacterized protein LOC104957847 isoform X1 [Notothenia coriiceps] | 0.0 |
| pfu_aug2.0_210.1_00435.t1 | gi|676483930|ref|XP_009063181.1| | hypothetical protein LOTGIDRAFT_176031 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_210.1_00435.t1 | gi|676443206|ref|XP_009050043.1| | hypothetical protein LOTGIDRAFT_173740 [Lottia gigantea] | 7.0e-39 |
| pfu_aug2.0_210.1_00435.t1 | gi|542255396|ref|XP_005463344.1| | PREDICTED: uncharacterized protein LOC102081822 [Oreochromis niloticus] | 8.0e-31 |
| pfu_aug2.0_210.1_00435.t1 | gi|260806191|ref|XP_002597968.1| | hypothetical protein BRAFLDRAFT_79791 [Branchiostoma floridae] | 1.0e-30 |
Transcript
| Transcript ID | pfu_aug2.0_210.1_00435.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_210.1_00435.t1 atggagaatatgacacaaaaaataaaagcgaaagggagaaaagaagcttgcggaaantggcgaatacgaatgagacgtca agtagaaagtttcttgaaaagagatttgtatactactatggctccaggaaagaaagatactataacattgaaaggagtga aaaagcaaaagcggtatctaaatgatactctcgcaaatattcataagaaattcatagctgaattcccttcagatccaatc tcgtattcttcattttgcaaaatgaggccgttctacgtggtaaacatgaaagttggtgacaggcagacatgcctctgtac tcttcatgaaaacgtaaaatacagaatttctaaacttcaccagttaggttttattagcgaaacttctcctgaaaaagtgt gtgaacttttagtatgtgacttcggaaggaagcagtgcgcttacaatgagtgtaacaggtgtcagaagaagcaatttgtc gatacttcaggtcgtgatacaagtagtcaagtcaaaattccacagtggtgtagacgaactgtcgagtacgaaaagaatgg agtaaagacctcagtaataaaaacagttaaagaagatgttcaaagtacaatagaaatactgatagacgagacaacgaaac ttctgaaggaaaagttctgcaagcatgtctttaatatacgtcatcagtatcatagcctgaagaccctaaaagactccata aatgataatgaagcagtcattcatgccgatttttcagagaattatgcgtgcaaattgaacgcggaaatccaggctatgca cttcgggggatctcggaaccaaatctccttgcatactgtagtcgtgtactccaaacatcgtcaggtgctttattgcacag tgtcagaggacactagacatggtcctgctgctatatgggcccaccttcatccagttctagaatggatccgatcagacatg ccccacatagatataccatccattttgtcagtgatggtcccaccactcaatatcgctctaagtccaatttcttcttacat cattcactcattcatggaaaatatggctttcataaatccacatggaactttaccgaggcagggcacggaaaaaagctccg ctgacggcgtagggggtcttgtaaagagaacagccgatgacttggtctcgaagggcaccgacataatagatgttaatact ttttacacgcacgtttcggagaggataagaaacgtgaattttgtcgtcattccttctgacaatatagacgccattcatat acccgaaacgcttaaaccggtgaaggggaccatgtccttacatcaagtcgtcagctacaaggacaaagttgatcggattg gcacgaggacattgagctgttttttatcattctataagagggcacagattctgatagctgatatttggtcatgctttgag gggaaaagttatggagaattcaacgacattgacactatcacaatgtttgctgattacagaaccgctgaacagattttcat gaaacttggtagtgtagtactaatggtcccctacaagtgttgttgtttatcgtcagaatccgccaacaagtggcgccacc acaggcaaaagataccacaatcattggtgttttttggagctatggaatattctgaggaattgatgaactatctgaaaaaa ggtacaatgatgaagacaggtgacaagtttgagatggaaatcagaggatgtagtatctgggccacagaggctatgaagac taattttatgttactgatagtgaaggctatgaagactaattttatgatatatgtccacttcacatgtgtagcttttgcta tgttgagctatgattgtcaggtacacgttaaatag |
|
Protein
| Protein ID | pfu_aug2.0_210.1_00435.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_210.1_00435.t1 MENMTQKIKAKGRKEACGXWRIRMRRQVESFLKRDLYTTMAPGKKDTITLKGVKKQKRYLNDTLANIHKKFIAEFPSDPI SYSSFCKMRPFYVVNMKVGDRQTCLCTLHENVKYRISKLHQLGFISETSPEKVCELLVCDFGRKQCAYNECNRCQKKQFV DTSGRDTSSQVKIPQWCRRTVEYEKNGVKTSVIKTVKEDVQSTIEILIDETTKLLKEKFCKHVFNIRHQYHSLKTLKDSI NDNEAVIHADFSENYACKLNAEIQAMHFGGSRNQISLHTVVVYSKHRQVLYCTVSEDTRHGPAAIWAHLHPVLEWIRSDM PHIDIPSILSVMVPPLNIALSPISSYIIHSFMENMAFINPHGTLPRQGTEKSSADGVGGLVKRTADDLVSKGTDIIDVNT FYTHVSERIRNVNFVVIPSDNIDAIHIPETLKPVKGTMSLHQVVSYKDKVDRIGTRTLSCFLSFYKRAQILIADIWSCFE GKSYGEFNDIDTITMFADYRTAEQIFMKLGSVVLMVPYKCCCLSSESANKWRHHRQKIPQSLVFFGAMEYSEELMNYLKK GTMMKTGDKFEMEIRGCSIWATEAMKTNFMLLIVKAMKTNFMIYVHFTCVAFAMLSYDCQVHVK |
|