Gene
| Gene Model ID | pfu_aug2.0_210.1_00436 |
|---|---|
| Locus | scaffold210.1 : 224326 ... 231938 : - |
| To GenomeBrowser | scaffold210.1:224326..231938 |
| Genes list of scaffold | scaffold210.1 |
| Synonym | pfu_aug1.0_3709.1_44738 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_210.1_00436.t1 | 2 | 1 | GEMIN8 | 79 | 81 | 0.0 | 169.0 | 0.57 | 8500.0 | -3.5 |
| pfu_aug2.0_210.1_00436.t1 | 2 | 2 | GEMIN8 | 111 | 345 | 0.0 | 169.0 | 0.0 | 0.0 | 169.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_210.1_00436.t1 | gi|676465808|ref|XP_009057363.1| | hypothetical protein LOTGIDRAFT_233316 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_210.1_00436.t1 | gi|524881675|ref|XP_005097487.1| | PREDICTED: uncharacterized protein LOC101864458 [Aplysia californica] | 7.0e-38 |
| pfu_aug2.0_210.1_00436.t1 | gi|632948855|ref|XP_007889827.1| | PREDICTED: gem-associated protein 8 [Callorhinchus milii] | 9.0e-32 |
| pfu_aug2.0_210.1_00436.t1 | gi|697508408|ref|XP_009681934.1| | PREDICTED: gem-associated protein 8 isoform X1 [Struthio camelus australis] | 1.0e-31 |
| pfu_aug2.0_210.1_00436.t1 | gi|612044206|ref|XP_007500969.1| | PREDICTED: gem-associated protein 8 isoform X1 [Monodelphis domestica] | 5.0e-31 |
Transcript
| Transcript ID | pfu_aug2.0_210.1_00436.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_210.1_00436.t1 atggcagagtccgactgttcaatgtctagtaccaatgcacaactaacagcaatgagccagtcggaggcagttattaaaga catctcccccattgtgtcaagtgatatcagtagctccgattcggacccgtcctcactggaaaacacattaacgagcctta cgcctgacccagattatatgctttcacaaggcgaatataaactagagtctggtacgcagtcagaagtgtggagacaaacc gaatcgtcttcatgtacagccggccaatcagaggactcagatttatcaccgcagaaacggagaaaacggatatcggaact tcaaggtccggattggtataagcacaaatgttttgatcgttattggaagcactataaacaagcaatgacgtggtgtcaga gacatttcagcatcatgaaatcaatgagggaaaaacagatgagaaaggcagcctcgactttctaccctccgtacaattgt tatatgcccggtgtattacatatccccgaccaaagttcctcaaatactatgagggggaggggaaggggtgtggtcagggg aagaggagttgggagggggaggacagcacattctggtaggaggaatttaccaaaagtaggcaaaactctgaagcaaatgc aagacgtaagcaggagaaatgacgaaacgcagaaagtggaagacactaatacggcacacacggaggacgactcgttagaa atggaaatcacagacgagatgctccagttctttgctcattcagagaaacacagaaaagagagagatgcctcaaaagacgt aacagaagaaggtgtggaaatcaaaagagtcaatatagagacagcaagtaagaaagtgcccacatgtgaagcgcctaagg agagacccggtatgagacgtacagaggaaatggtcacgttgtacggcaaaggcgcggccatgatacacgggatggaaacg gcactacagatgacgtacgacagaaacacggatatcaaacaaccaaaactctggccaaatatgccactgaaattagtgtt cagttga |
|
Protein
| Protein ID | pfu_aug2.0_210.1_00436.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_210.1_00436.t1 MAESDCSMSSTNAQLTAMSQSEAVIKDISPIVSSDISSSDSDPSSLENTLTSLTPDPDYMLSQGEYKLESGTQSEVWRQT ESSSCTAGQSEDSDLSPQKRRKRISELQGPDWYKHKCFDRYWKHYKQAMTWCQRHFSIMKSMREKQMRKAASTFYPPYNC YMPGVLHIPDQSSSNTMRGRGRGVVRGRGVGRGRTAHSGRRNLPKVGKTLKQMQDVSRRNDETQKVEDTNTAHTEDDSLE MEITDEMLQFFAHSEKHRKERDASKDVTEEGVEIKRVNIETASKKVPTCEAPKERPGMRRTEEMVTLYGKGAAMIHGMET ALQMTYDRNTDIKQPKLWPNMPLKLVFS |
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