Gene
| Gene Model ID | pfu_aug2.0_210.1_00437 |
|---|---|
| Locus | scaffold210.1 : 235590 ... 254068 : - |
| To GenomeBrowser | scaffold210.1:235590..254068 |
| Genes list of scaffold | scaffold210.1 |
| Synonym | pfu_aug1.0_2237.1_51575 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_210.1_00437.t1 | 1 | 1 | GPS | 506 | 554 | 1.5e-11 | 44.1 | 6.8e-15 | 3.4e-11 | 43.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_210.1_00437.t1 | gi|585718497|ref|XP_006825892.1| | PREDICTED: latrophilin-3-like [Saccoglossus kowalevskii] | 4.0e-30 |
| pfu_aug2.0_210.1_00437.t1 | gi|524906047|ref|XP_005108372.1| | PREDICTED: uncharacterized protein LOC101847842 [Aplysia californica] | 8.0e-20 |
| pfu_aug2.0_210.1_00437.t1 | gi|545521630|ref|XP_005628295.1| | PREDICTED: latrophilin-3 isoform X4 [Canis lupus familiaris] | 4.0e-19 |
| pfu_aug2.0_210.1_00437.t1 | gi|743742578|ref|XP_010965827.1| | PREDICTED: latrophilin-3 isoform X5 [Camelus bactrianus] | 4.0e-19 |
| pfu_aug2.0_210.1_00437.t1 | gi|743742584|ref|XP_010965830.1| | PREDICTED: latrophilin-3 isoform X8 [Camelus bactrianus] | 5.0e-19 |
Transcript
| Transcript ID | pfu_aug2.0_210.1_00437.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_210.1_00437.t1 atgatgaacaggttgtatcgcatacgacttttatactgtgtgactttactttttgtatgtcaattaacactggcactaga cggctgcttcgagttcaagaacaagtacgaattctgctgccacgaaattcaaccaaatatcagcattaacgggtcatctc gaacactcacggagaccagtgatatccgcgtgacaaccaactgcaccacttacgtcatacagacgacgtcacctagcagc agaattaacataacacgtgtttatgtagataggagatacgtcaacaaaggccagcctaatgtaacaaatcctgggaactt tgtcattattgaaggtctgaggggtgaagatatgaacgacccatgggcatacgatacttacagagatacaggtcctctgg ggatgtcaaaatctgataccattacactgagggtgacaaaagtagcacaactacactcagaattaatattgacatatgaa gaggtcaatccttgtttacctgatccatgtgaagaaggcctttgtaaaccaaacgatgattacaccagccatatttgtta cacaagttgtcctgaagttgactacaagtatttgaattccaccatcagatggcttaagacgcccagtggaaaaacggcaa aactaccttgtccagcatctgctataggtgttgtcactagacgatgtgtacttgttgatggtataccagagtgggagagg ccgaacctgactggttgtgttagtaaagagatgaaactgatacagtttcaggcagaggaactgaaatcgtctgatatggt cacgaaagcagagattctgaatgtcactgacggtattgtctcagtgctgatagggaacgtatccgaatcaacactacttc cgggtgacttggctgttgccacggacgctatgacaacggtatcagaggttgtcagaaacgccacggatcatccattaggc ttggaggaaattgcaaagggatacggagctgcctttgatgaaatagttgatccattgacggaacagatatggcgtcaaac agaatttgattacacggaaaacaaaatgaagatgttaatatcttcagtcgaaaagctttcatcgaatgtagctgagaaga gagaacaatttctactaagacgcagaagagaagctcaaaaatattctgttgctgattctattaacgttgaatcaagaaat atagattttcatatcaatttccgtgagagaattgctttatgtgaggaatcctcggattttaacgttggagataacaacag tattacactcacttcctctgtatttgcaaaagctgtgaggaattccgaaggtaatctgttgctcaattttgctcaagtaa actagtctgagaatgatacaaaatctaccacagtatttaactctgacatagtatcagcgagcattctcagtgttcctgag ggaagcatcgtgagactcacaaaaccagttatcatcgtttttaaagtttcgaatttttcattatggcttggacatagacc aaaatgtgcttttatgaacatgagcgaaactgacactgacaagagatggatttcagagggttgtagattcgacaaatcac tgagcaatactagtcatgtgacatgtgtttgtgatcacctgaccaactttgctgtcattatggacgtcttttctgtagag gtacagaatgcgtacgagagaagatcattacgtaagagtcgttccagtttggcctccacttttaataaaaggaaagattt gatcaatgacctcagctcatcgatgaacacattgataaccgagacgtcctctacatgtacaacccggaaatcgtcaccag catcgagagcgcatgaccggatccacagagactctgctctgtatgacaaacttggaatgacacgtgataaagttaatgac aatcccctgggtaggacttatagtgacaaccctattggtggtcggtcctacaatgacagtcccttgggtaggtcctatag cgatggtatcccatattggagaaggaaaaatacttacaatcagaatgcgaggggacatatcgaggacgggtacgccgagc cacctgacattctcagaaatgactacttctttgacgaccagcaagacgtttcgtatgtaattccttatggtagatatgtt caaaacaacaacaacgacgatacagatttcacaggaaagaaaactactgaagatatttatagcaagccagtcaaacgcaa aagttcttctttgccgcgttcggttggtcaaagttcaaatcatgtacatttccttgaccaaagcgatgttgttggtcctc cattggctgataatctacaacgaaagcagacaagttctaatttacatatgaacgaggagagaaagaactttacaaagagt tttctcgaggaacttcaagaaaaagctgctcaaattggtataaaggacactgatgaacatgttgaaggcacacatctata a |
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Protein
| Protein ID | pfu_aug2.0_210.1_00437.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_210.1_00437.t1 MMNRLYRIRLLYCVTLLFVCQLTLALDGCFEFKNKYEFCCHEIQPNISINGSSRTLTETSDIRVTTNCTTYVIQTTSPSS RINITRVYVDRRYVNKGQPNVTNPGNFVIIEGLRGEDMNDPWAYDTYRDTGPLGMSKSDTITLRVTKVAQLHSELILTYE EVNPCLPDPCEEGLCKPNDDYTSHICYTSCPEVDYKYLNSTIRWLKTPSGKTAKLPCPASAIGVVTRRCVLVDGIPEWER PNLTGCVSKEMKLIQFQAEELKSSDMVTKAEILNVTDGIVSVLIGNVSESTLLPGDLAVATDAMTTVSEVVRNATDHPLG LEEIAKGYGAAFDEIVDPLTEQIWRQTEFDYTENKMKMLISSVEKLSSNVAEKREQFLLRRRREAQKYSVADSINVESRN IDFHINFRERIALCEESSDFNVGDNNSITLTSSVFAKAVRNSEGNLLLNFAQVNXSENDTKSTTVFNSDIVSASILSVPE GSIVRLTKPVIIVFKVSNFSLWLGHRPKCAFMNMSETDTDKRWISEGCRFDKSLSNTSHVTCVCDHLTNFAVIMDVFSVE VQNAYERRSLRKSRSSLASTFNKRKDLINDLSSSMNTLITETSSTCTTRKSSPASRAHDRIHRDSALYDKLGMTRDKVND NPLGRTYSDNPIGGRSYNDSPLGRSYSDGIPYWRRKNTYNQNARGHIEDGYAEPPDILRNDYFFDDQQDVSYVIPYGRYV QNNNNDDTDFTGKKTTEDIYSKPVKRKSSSLPRSVGQSSNHVHFLDQSDVVGPPLADNLQRKQTSSNLHMNEERKNFTKS FLEELQEKAAQIGIKDTDEHVEGTHL |
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