Gene
| Gene Model ID | pfu_aug2.0_210.1_00438 |
|---|---|
| Locus | scaffold210.1 : 264089 ... 295088 : - |
| To GenomeBrowser | scaffold210.1:264089..295088 |
| Genes list of scaffold | scaffold210.1 |
| Synonym | pfu_aug1.0_23511.1_40427 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| serine threonine-protein kinase partial | GO:0004672 GO:0006468 GO:0007409 GO:0007417 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_210.1_00438.t1 | 2 | 1 | Pkinase | 136 | 393 | 0.0 | 257.1 | 0.0 | 0.0 | 247.3 |
| pfu_aug2.0_210.1_00438.t1 | 1 | 1 | Pkinase_Tyr | 137 | 388 | 7.7e-36 | 123.4 | 3.5e-39 | 1.0e-35 | 123.0 |
| pfu_aug2.0_210.1_00438.t1 | 2 | 2 | Pkinase | 394 | 420 | 0.0 | 257.1 | 0.00037 | 1.1 | 8.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_210.1_00438.t1 | gi|269785145|ref|NP_001161528.1| | doublecortin-like protein kinase [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_210.1_00438.t1 | gi|471409033|ref|XP_004386095.1| | PREDICTED: serine/threonine-protein kinase DCLK1 [Trichechus manatus latirostris] | 0.0 |
| pfu_aug2.0_210.1_00438.t1 | gi|700400662|ref|XP_009941200.1| | PREDICTED: serine/threonine-protein kinase DCLK2, partial [Opisthocomus hoazin] | 0.0 |
| pfu_aug2.0_210.1_00438.t1 | gi|632948186|ref|XP_007889453.1| | PREDICTED: serine/threonine-protein kinase DCLK1 isoform X1 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_210.1_00438.t1 | gi|149064748|gb|EDM14899.1| | double cortin and calcium/calmodulin-dependent protein kinase-like 1, isoform CRA_c [Rattus norvegicus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_210.1_00438.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_210.1_00438.t1 atggtatcgtcattaccagatttctttcgagaagaagatgtgttcattgcatacggccaggaaagatactctcaggacga cttcgctctagatgataatgaggtcaaactagtcacaccatataaaaccaccccattccgtcagagtgagaggattacat taaagtcacctaaatcagggagggcatcgtctcggaaactaacattgtcaaacagaagtctcaatgaagagaacattgat ttttcgaagaagtcaacctcaacgcctagtcctaaatcaccacttgcctcacccagatccggccggaagctcagggctgt ttcagcgccaaaataccgcaatgcaaatggctcaaatgaagatgatcatgctcaaatggcgggaccaccaagtctgtctc aaaaataccagatcggcagggtcataggggaggggaactttgctgtggtcagtgaatgtatagacagaaaaacaaacaaa ttgtacgcattaaagaaaatcgagaaaaagagttgtcaaggaatggagaggatggtagagaacgaagtatctattatgcg aaaagtaaatcatccgaatataatattgctagttgaagagctagacaccagggacgagttgtatttagtcatggaatacg tcaagggcggcgacttatttgatgacatcacgatgtcaacgaaatatacagaaaaagacgcaagtggaatgatattcaac ttagcaagtgcactgaaatatcttcatggcttaaaaattgtgcatagggatgtaaaaccagaaaatctattggtatctat gcactctgatggttcaaagtccctgaagttaggtgattttggtttagccacatattgtgaggagactctctatactgtat gtggcactcctacttatgtggcaccggaaattatagaggaagtcggatatgacttcaaagtggatgtttgggcagcaggt gttattttgtacatcctactttgtggtttcccgccattcgttagtgctgagaacgatcaagatgagttgtttgacaagat tctggctggctcctttgaatttactgctccattctgggacgatgtgtccgattcagcaaaggaactgatctcttccatgt tgatactatcacccgataacagaatggctgccagtgaagtactagaacatccatgggtcacagaacttatctcttccatg ttgatactatcacccgataacagaatggctgccggtgaagtactggaacacccatgggtcacatcagagacagctcggga taacgacctccatgttgctggagtcattcagaagaactttgcaagaaggactaatccgaccagaagctcggctggcatca ggatagtggcaagaacggccatggacaaacgatcacggtatttccagggaagaaaagcagctggactgtcgctgcagacc aaggaagaagccgaagaggaggatggggatgaaatcttttaa |
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Protein
| Protein ID | pfu_aug2.0_210.1_00438.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_210.1_00438.t1 MVSSLPDFFREEDVFIAYGQERYSQDDFALDDNEVKLVTPYKTTPFRQSERITLKSPKSGRASSRKLTLSNRSLNEENID FSKKSTSTPSPKSPLASPRSGRKLRAVSAPKYRNANGSNEDDHAQMAGPPSLSQKYQIGRVIGEGNFAVVSECIDRKTNK LYALKKIEKKSCQGMERMVENEVSIMRKVNHPNIILLVEELDTRDELYLVMEYVKGGDLFDDITMSTKYTEKDASGMIFN LASALKYLHGLKIVHRDVKPENLLVSMHSDGSKSLKLGDFGLATYCEETLYTVCGTPTYVAPEIIEEVGYDFKVDVWAAG VILYILLCGFPPFVSAENDQDELFDKILAGSFEFTAPFWDDVSDSAKELISSMLILSPDNRMAASEVLEHPWVTELISSM LILSPDNRMAAGEVLEHPWVTSETARDNDLHVAGVIQKNFARRTNPTRSSAGIRIVARTAMDKRSRYFQGRKAAGLSLQT KEEAEEEDGDEIF |
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