Gene
| Gene Model ID | pfu_aug2.0_210.1_00443 |
|---|---|
| Locus | scaffold210.1 : 370301 ... 399988 : - |
| To GenomeBrowser | scaffold210.1:370301..399988 |
| Genes list of scaffold | scaffold210.1 |
| Synonym | pfu_aug1.0_24415.1_26161 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_210.1_00443.t2 | 4 | 1 | Thymosin | 7 | 41 | 0.0 | 154.8 | 7.9e-15 | 1.9e-11 | 43.3 |
| pfu_aug2.0_210.1_00443.t2 | 4 | 2 | Thymosin | 47 | 78 | 0.0 | 154.8 | 2.7e-14 | 6.6e-11 | 41.6 |
| pfu_aug2.0_210.1_00443.t2 | 4 | 3 | Thymosin | 78 | 117 | 0.0 | 154.8 | 1.3e-14 | 3.2e-11 | 42.6 |
| pfu_aug2.0_210.1_00443.t2 | 4 | 4 | Thymosin | 120 | 154 | 0.0 | 154.8 | 2.5e-14 | 6.2e-11 | 41.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_210.1_00443.t2 | gi|114052645|ref|NP_001040486.1| | thymosin isoform 1 [Bombyx mori] | 3.0e-28 |
| pfu_aug2.0_210.1_00443.t2 | gi|524869393|ref|XP_005091491.1| | PREDICTED: gelsolin-related protein of 125 kDa-like [Aplysia californica] | 2.0e-25 |
| pfu_aug2.0_210.1_00443.t2 | gi|642913913|ref|XP_008201211.1| | PREDICTED: uncharacterized protein LOC663390 isoform X3 [Tribolium castaneum] | 1.0e-24 |
| pfu_aug2.0_210.1_00443.t2 | gi|91077296|ref|XP_976221.1| | PREDICTED: uncharacterized protein LOC663390 isoform X2 [Tribolium castaneum] | 4.0e-24 |
Transcript
| Transcript ID | pfu_aug2.0_210.1_00443.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_210.1_00443.t1 atggcgaccgaggtcttgaaggacatcacaaaagctgaccacggcaaacttcatcacgtggatgtcaacgaaaagaaccc tctccccacagcagaagacgtccataaagagaaatcacaccagaaattgctacagaacgtcgaaggtttcgattccacca aactcaaccacgctgatacccaggaacgggtcgtactacccgatacaaatacaatccaacaagagaagacggaggaggaa ttgaaggacggtattagccgctttgatcgcgccagtctcaaaaagacagacatacaagaaaaagtcgtactaccagacaa agataccattcaaagtgaaaaacaggataaggagttgttggattcaatagaggggttcacaaggacgaagttaaggcgag cgaacactgaggagaaaaactgtctacccgacaacgaagatattgaaaaggaaaaacaagagaagcagcatcaagaatcc ataaaggcttttgataaaagtaaagacttaaaacagacggaaacgcaagtcaaacaaagcttaccatccaaagaagatat tgcagcagaaaaggcaggttctggcgacgccaagtaa |
|
| Transcript ID | pfu_aug2.0_210.1_00443.t2 |
| Definition | - |
>pfu_aug2.0_210.1_00443.t2 atggcgaccgaggtcttgaaggacatcacaaaagctgaccacggcaaacttcatcacgtggatgtcaacgaaaagaaccc tctccccacagcagaagcaatccaacaagagaagacggaggaggaattgaaggacggtattagccgctttgatcgcgcca gtctcaaaaagacagacatacaagaaaaagtcgtactaccagacaaagataccattcaaagtgaaaaacaggataaggag ttgttggattcaatagaggggttcacaaggacgaagttaaggcgagcgaacactgaggagaaaaactgtctacccgacaa cgaagatattgaaaaggaaaaacaagagaagcagcatcaagaatccataaaggcttttgataaaagtaaagacttaaaac agacggaaacgcaagtcaaacaaagcttaccatccaaagaagatattgcagcagaaaaggcaggttctggcgacgccaag taa |
|
Protein
| Protein ID | pfu_aug2.0_210.1_00443.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_210.1_00443.t1 MATEVLKDITKADHGKLHHVDVNEKNPLPTAEDVHKEKSHQKLLQNVEGFDSTKLNHADTQERVVLPDTNTIQQEKTEEE LKDGISRFDRASLKKTDIQEKVVLPDKDTIQSEKQDKELLDSIEGFTRTKLRRANTEEKNCLPDNEDIEKEKQEKQHQES IKAFDKSKDLKQTETQVKQSLPSKEDIAAEKAGSGDAK |
|
| Protein ID | pfu_aug2.0_210.1_00443.t2 |
| Definition | - |
>pfu_aug2.0_210.1_00443.t2 MATEVLKDITKADHGKLHHVDVNEKNPLPTAEAIQQEKTEEELKDGISRFDRASLKKTDIQEKVVLPDKDTIQSEKQDKE LLDSIEGFTRTKLRRANTEEKNCLPDNEDIEKEKQEKQHQESIKAFDKSKDLKQTETQVKQSLPSKEDIAAEKAGSGDAK |
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