Gene
| Gene Model ID | pfu_aug2.0_2106.1_21935 |
|---|---|
| Locus | scaffold2106.1 : 1 ... 8460 : + |
| To GenomeBrowser | scaffold2106.1:1..8460 |
| Genes list of scaffold | scaffold2106.1 |
| Synonym | pfu_aug1.0_6126.1_45350 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2106.1_21935.t1 | 1 | 1 | PCIF1_WW | 274 | 430 | 0.0 | 213.8 | 0.0 | 0.0 | 212.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2106.1_21935.t1 | gi|556947539|ref|XP_005986780.1| | PREDICTED: phosphorylated CTD-interacting factor 1 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_2106.1_21935.t1 | gi|617512395|ref|XP_007542901.1| | PREDICTED: phosphorylated CTD-interacting factor 1 [Poecilia formosa] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2106.1_21935.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2106.1_21935.t1 tccattctggaattttgagattcctacaaactgtgtgatatttgagcgtgtaccgtgctgccagcctccgcctcttccgg agatcgagcagatgagagctcagctagtggctagactaagacagcactgccaggagttatgtcatactagagaaggaatt gatgccccagtggaatcatttaatcgttggcttttggaaaggaaagtttgtgataagggaatcgattcaatgttaccgtc ggcatgtgcacgggaagtctcaccgtcaatgtaccgggaaattatgaacgatataccagtcaaacttgtcaaacctaaat attcgggggatgcaaggaaacagctcttcaagtatgcagaggcagcgaagaagatgattgaaaccagaaatgcatcatct gacagcagaaaagtggtgaagtggaacgtagaggatacgtttacatggttacggaaacaacagaatgcttcatatgagga ttatctggaacgattagcccatttgaagcgtcagtgccagccccacattatggaagcagctaagagttctgtagagggca tatgtagtaaaatatataacatgtcctgtgaatctgtacgtaaacttcacgatcgacactggcagatactcaaagagcat aatataaacgagccggcacctttacccaatccccctaacccgagaaaagtcctgtgttactctgtacaaatgatggtacc atgtccccgccacccacaggtagaaatgctccaggagaaggagttacacctgcttaaatataacggagaagttctcaaat taaacagctcacatttctataaactggagcagttatataaactacattgtagagatgatcaaaggtttgagaattttctg agtcgagtttggtgcttacttagacggtatcagacattatttggtttatcagagaatgaaggaagtggattacaaggagc tcttcctatatctgtgtttgagtgtttacatcgtgtgtttggtgtgacatttgagtgttttgcgtctccgttgaactgtt attacagacagtattgttcggcattttcagataccgatggatattttggatccagaggtccaatcttaaatttccatcct gtggtcgggtcatttgaagccaatccaccgttctgtgaagagctgatggagagcatggtagaccattttgagaatttact gatggagtcacaggagcctctgtcgtttatcgtatttatcccagaatggagggacccaccaactgaagccctgatcaggc tggaatccagcagagatgacgctaactttaagtccttacacggcacggtggtgattttcctacaaaatgacgcaggattt gccaaatggggacctactcctgaaaaagtgaaagaattgttactctctgccaaacccaaagacactgtatga |
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Protein
| Protein ID | pfu_aug2.0_2106.1_21935.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2106.1_21935.t1 PFWNFEIPTNCVIFERVPCCQPPPLPEIEQMRAQLVARLRQHCQELCHTREGIDAPVESFNRWLLERKVCDKGIDSMLPS ACAREVSPSMYREIMNDIPVKLVKPKYSGDARKQLFKYAEAAKKMIETRNASSDSRKVVKWNVEDTFTWLRKQQNASYED YLERLAHLKRQCQPHIMEAAKSSVEGICSKIYNMSCESVRKLHDRHWQILKEHNINEPAPLPNPPNPRKVLCYSVQMMVP CPRHPQVEMLQEKELHLLKYNGEVLKLNSSHFYKLEQLYKLHCRDDQRFENFLSRVWCLLRRYQTLFGLSENEGSGLQGA LPISVFECLHRVFGVTFECFASPLNCYYRQYCSAFSDTDGYFGSRGPILNFHPVVGSFEANPPFCEELMESMVDHFENLL MESQEPLSFIVFIPEWRDPPTEALIRLESSRDDANFKSLHGTVVIFLQNDAGFAKWGPTPEKVKELLLSAKPKDTV |
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