Gene
| Gene Model ID | pfu_aug2.0_2106.1_21939 |
|---|---|
| Locus | scaffold2106.1 : 75461 ... 97525 : - |
| To GenomeBrowser | scaffold2106.1:75461..97525 |
| Genes list of scaffold | scaffold2106.1 |
| Synonym | pfu_aug1.0_3401.1_66673 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2106.1_21939.t1 | 2 | 1 | RNB | 323 | 356 | 0.0 | 218.5 | 1.9e-07 | 0.0014 | 18.0 |
| pfu_aug2.0_2106.1_21939.t1 | 2 | 2 | RNB | 358 | 618 | 0.0 | 218.5 | 0.0 | 0.0 | 200.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2106.1_21939.t1 | gi|524898567|ref|XP_005105731.1| | PREDICTED: exosome complex exonuclease RRP44-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_2106.1_21939.t1 | gi|665786453|ref|XP_008552462.1| | PREDICTED: exosome complex exonuclease RRP44 [Microplitis demolitor] | 0.0 |
| pfu_aug2.0_2106.1_21939.t1 | gi|755941053|ref|XP_011298315.1| | PREDICTED: exosome complex exonuclease RRP44 [Fopius arisanus] | 0.0 |
| pfu_aug2.0_2106.1_21939.t1 | gi|719767735|ref|XP_010218138.1| | PREDICTED: exosome complex exonuclease RRP44, partial [Tinamus guttatus] | 0.0 |
| pfu_aug2.0_2106.1_21939.t1 | gi|759054019|ref|XP_011336198.1| | PREDICTED: exosome complex exonuclease RRP44 [Cerapachys biroi] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2106.1_21939.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2106.1_21939.t1 atggttagacatagaagtgctccagcttacaagaggctcaaagacatcatagctaatccagataaacatttctatacatt ctacaatgaattcaacaaagacacgtatgttgagagacaaccaggggaagtggttaacgacagaaatgatcgagccattc gggaggcgacgaactggtatcagatacatctacagaagtttggtgataagaagatgggagtggtactactgactaatgat gctgataataagaggaaagcctttgatatgggacttgtaacatttacagtccatgagtatgtagagagtctagtgaactg tggagatttggtggacagattatcaagtgccggtgccaaactgtatgttggggataagatgcagtttccggagcacctgc cgttatcgaccatacagaaaggactaaaaactggtaaatatctacagggtaattacatggccagtagagagaactacctg gaggcagaagtaggcgtacatgatcaggatagaatgatcttcatccaaggacataagaatttgaatcgagccgttaacgg tgacatagtggccatagagctattaccagaagctgagtggagttgtccttcttcccttgttctggaagagacggaggaaa aagccgacgatgaaaacttggatgtagagagcacaaggcatcttgtaataactgctgagaaaagaattcctaaaatccgt atagaaacacgacaggccaaggatctgatgggacagcgtatagttgtggctatagataactggccaaggaattctagata tccccagggtcattttgttagaaaacttggtaatgtcggtgacaaagctacggagaacgaagttctattattagaacatg acgtgcctcatacaggattctccgaagccgtactcagcttccttcccaagatgccatgggttataacagaagaggacaga aagcatcgagtagatctgagagacatagacatatgtagtgtggatccaccgggatgtacggatattgatgatgcgttaca ttgtcgagacttaccaaatggaaacttagagaggatagacatggtaccagaattactgagctcaaacctatgttcccttc gagcagatgtcgaaaggtttgcattttctgtaatatgggaaatgacacatgaggcagatattatcaacaccaagtatcat aaaagtataatcaaatcaagggcagctttaacgtatgctgaagcacagatgaggatagacgatgccaagatgaacgacgc tattaccaaaagtttacgtaaccttaataaaatagctaagattctcaaacgacggagaatagataacggagcattgacac tggcttccccagagatcagattcaacatagacagcgagacacatgatcctatagatgtagagaccaaacagatcagagat acaaattccatggttgaggagttcatgttgttagccaatgtatccacagcacagaaaactctagaggagttcccagactg tgcctgtctcaggagacatccatctcctcctcactctaactttgatcctctcattaaagctgcagaatctaagggtttta agatagatgtatcatgtggtaaggccctagcagacagcctggagagtgccgtgattccaggcgatccttactttaacacc atgttacgtataatggctacccgatgtatgatgcaggcggtttatttctgtagcggcatgctgccccagtcggagtacaa acattatggtctcgccgctgatatttacacacacttcacatctcctattagaaggtactctgacatcatcgttcatagat tacttgccgtttgtatcggtgcggacagctcgtacccagaacttactgacaaaaggaaaacacagactgtgtgcaataat ctgaactaccgtcacaagatggctcagtacgctggtagagcctctgtcaaccttcatactcatatatttttcaagaacag agtagttgatgaggagggctatattttatttgtccgtaagaatgccctccagatcctaattcctaagtacggccttgaga ctacactgtacctaccaggggacaaacagaaggacggacctactttcacattcagtgaagaggatcatacccagacatgt ggggacgtgatatttcgagtgtttgaccgtgtcatcgtccagctcagcattgaccaatccaacgtccagcatctgaaact acaaaccaaactagtccaacctcagattgcaggtttcagcattgacccagttaagagggaggcagacagccagggtgatg aacctccgaagaagaagaagaggaaatag |
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Protein
| Protein ID | pfu_aug2.0_2106.1_21939.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2106.1_21939.t1 MVRHRSAPAYKRLKDIIANPDKHFYTFYNEFNKDTYVERQPGEVVNDRNDRAIREATNWYQIHLQKFGDKKMGVVLLTND ADNKRKAFDMGLVTFTVHEYVESLVNCGDLVDRLSSAGAKLYVGDKMQFPEHLPLSTIQKGLKTGKYLQGNYMASRENYL EAEVGVHDQDRMIFIQGHKNLNRAVNGDIVAIELLPEAEWSCPSSLVLEETEEKADDENLDVESTRHLVITAEKRIPKIR IETRQAKDLMGQRIVVAIDNWPRNSRYPQGHFVRKLGNVGDKATENEVLLLEHDVPHTGFSEAVLSFLPKMPWVITEEDR KHRVDLRDIDICSVDPPGCTDIDDALHCRDLPNGNLERIDMVPELLSSNLCSLRADVERFAFSVIWEMTHEADIINTKYH KSIIKSRAALTYAEAQMRIDDAKMNDAITKSLRNLNKIAKILKRRRIDNGALTLASPEIRFNIDSETHDPIDVETKQIRD TNSMVEEFMLLANVSTAQKTLEEFPDCACLRRHPSPPHSNFDPLIKAAESKGFKIDVSCGKALADSLESAVIPGDPYFNT MLRIMATRCMMQAVYFCSGMLPQSEYKHYGLAADIYTHFTSPIRRYSDIIVHRLLAVCIGADSSYPELTDKRKTQTVCNN LNYRHKMAQYAGRASVNLHTHIFFKNRVVDEEGYILFVRKNALQILIPKYGLETTLYLPGDKQKDGPTFTFSEEDHTQTC GDVIFRVFDRVIVQLSIDQSNVQHLKLQTKLVQPQIAGFSIDPVKREADSQGDEPPKKKKRK |
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